F18120

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F18120

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F18120

Determination of introduced cDNA(s)

  • RAFL09-96-C10 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-96-C10 - Resource: pda17923

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-96-C10 - full reading
    CCGGGGTTAG TAGTTATATA TATGTTGGAG GTGAAAGGAA TAAAATAAAA 
    TTTGTTCTAG GTGGATTCTT AAGAAAAAGA AGGAAACGAA AACAGAGGAA
    TAACAATGGC AGGGAGAATA AGCTGCTGTC TAAATCTTCC TCCCCTAGAT
    TCAAATTCTG CACAATCATT AGCTTCACTG CTCAAGACAA CGTCAAAGAT
    CTCTTGTAGG AGAACAGAAA ATGAGACAGA GCCACGGAAA AACAAGTGTT
    CTTTTGTCTT GGGGGTGGCG GCAACTGTCG TAATCGGCGG GATTCAGATC
    AATGATGTTG CATCAGTGGA AGCTGCGGTT GTGAAATCGC CGGTAGAAGA
    GATGGCTGCG GGTGTGGTGC CGCCGCGGAG GTGGAGTGAC AAGAGGACGT
    GTCCGCCTTG GCTTGAGAAC TCGCTAGAGA CCATCGTACC GGAGAATCTT
    CCTCGTCCGT CTGCTCATCG ACGTTTGGAG TTAGCCGGAT TAGCTAAGGG
    TGATGCACCG CCGGTCGGTG TGGTGATGAC ACGTGTCAAC AGGGGTGGTT
    GTTTCTCCGT GTAAATTGGA AGTTCATTAC GTGTAAGGGA GATTGTTAGG
    CAGGTGTAAA AAAAGTCAAT TAGAAACAAA TAATACACAC AAAAACTATT
    GTAGATATAT TAAATTTTAA GTATTTGTTT GTGTAAAAAA AAAA

    Gene models with high sequence identity

    1. AT2G25625.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G25625.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Has 24 Blast hits to 24 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR