F18213

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F18213

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F18213

Determination of introduced cDNA(s)

  • RAFL15-06-D14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL15-06-D14 - Resource: pda19148

    full reading [+] show sequence

    Nucleotide sequence: RAFL15-06-D14 - full reading 
    TCATCGCTGT CTGGAACAGC GAAACCTCCA TTACCTTCGT CTTTCTTCCT 
    CAGTCGCCCT ACAATGGCTT TGCCTTTGTC TGGCACGCGC CACCTCACGC 
    GCGCTCTCCT CTCTAATGTC ACTCTTATGG CTCCTCCTCG GATTCCTTCC 
    TCTGTTCACT ACGGTGGATC TCGGTTAGGT TGTTCGACCC GGTTCTTCTC 
    AATTCGATGT GGAGCTAACC GGTCAGGTTC TACTTACTCG CCGCTTAACT 
    CTGGCTCTAA CTTTAGTGAT CGGCCTCCGA CGGAGATGGC TCCTTTGTTT 
    CCGGGATGCG ATTATGAGCA CTGGCTTATT GTTATGGATA AACCTGGCGG 
    GGAAGGCGCG ACTAAGCAGC AGATGATTGA TTGTTACATT CAAACCCTAG 
    CGAAAGTCGT TGGAAGTGAG GAAGAGGCGA AGAAGCGAAT CTACAATGTT 
    TCATGTGAGA GGTATTTAGG GTTTGGTTGT GAGATTGATG AAGAGACATC 
    CACTAAGCTT GAAGGTTTAC CAGGTGTTCT GTTTGTGCTT CCAGATTCCT 
    ATGTGGATCC TGAAAACAAA GATTATGGAG CTGAGCTGTT TGTTAATGGA 
    GAGATAGTCC AACGATCACC AGAGAGGCAG AGGCGGGTTG AGCCACAGCC 
    GCAGAGAGCC CAAGATAGAC CGAGATACAA TGACAGAACT CGTTACTCTC 
    GCCGCAGAGA AAACACAAGA TGAACTGTAA CTGAAGATGG TATACATACA 
    CCTAAGCTAA GCCAGTATGA GGATGATGAT GATGATGATG ATAATGGTGG 
    TGAGGATGAT GTTACTGCCG CCACACGGGG GCTCTGTATT CCAGTCCGTT 
    GCAGTTAATG GACCGGGCTT ACTTTGGATA TTGTTGAAAT TCTAAATTTT 
    GTTTCTATGT AACAATTTTA TTTAATAATG TAAATTGAGG TTTCACTGTT 
    TTAGGAAATT ACTTTGGGTA AAAAAAAAA

    Gene models with high sequence identity

    1. AT2G33430.1 [+] show detail - differentiation and greening-like 1
      E-value: 0; Score: 99.79

     

    InterPro Scan Digest

    See the detailed result >

    AT2G33430.1

    Model type
    Protein coding
    Short Description
    differentiation and greening-like 1
    Computational Description
    differentiation and greening-like 1 (DAL1); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: plastid organization, endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA); LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: plastid developmental protein DAG, putative (TAIR:AT1G32580.1); Has 251 Blast hits to 228 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 251; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR