F18248

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F18248

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F18248

Determination of introduced cDNA(s)

  • RAFL06-82-A20 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-82-A20 - Resource: pda07707

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-82-A20 - full reading 
    AAGGACGCGA CAGTAGGAAA ATGGCTTTCG CAGCGACGCT CTTCGTTCCA 
    CCTCCAGTAG CCGTCCGATC TCCGGCTAGA TTCCTTGGCC GTCTCTCAAT 
    TCCTTGCCTG CTCCAAGTTC TTCCGACTAA TGGTGCAGCG AGTCCCCGGC 
    AAGTGAAGAG GGCAATTGTA GCAAATGCTT CGCCGGGAAA CGGTGGCGTT 
    AAGGCCGAGG AAGAAGACGG AGTTTCTCTG GGTACTATGA AGCTTCCCGT 
    AGATACCGAT CTCGCTAGAT TCGAAACTCT TCTATTTCAG TGGGCGAATA 
    GTCTTTGCCA AGGAGCCAAT CTACCTCTAC CTGTTCCTCT CAAGGTGGAC 
    AGAATAAGCG GAGGAGCGAG GTTAGGATTC ATAGTGATGG AAGATGAAGG 
    CAAGACCGAT GTTCCGGTTT ACATTGACTG TTTGGTTTTC CAAACAACAG 
    AGAATGGTGT AGTGTTCCAA GCGACGCGTA ATGGGCGGAA GAAAGATAAA 
    GCACCTCCGG GAGAAGAAAG AATCATGAGA AGTCTCTTAG GAGCCCTCAA 
    AAAAGCTGTG GAGATTGCTC GAGTCACATA AACATTTGCC TCTTTCAGTT 
    GAAACCGAAT TTCGAATATC TCTTTTGCTC TACGTCTTTC TAGTTTCTTA 
    CTGCTACTAC TACTTATCTG AGACATGATC ACTGGTAAAT AATAAAGTTT 
    TAAAGTTTGG GGCCAAAAAA AAAAAAAAAA

    Gene models with high sequence identity

    1. AT2G36145.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G36145.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast stroma, chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR