F18348

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F18348

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	cauline leaf (PO:0000013)	decreased size (PATO:0000587) (Cauline leaf::Shape::small) abnormal (PATO:0000460) (Cauline leaf::Others)
	rosette leaf (PO:0000014)	present in greater numbers in organism (PATO:0000470) (Rosette leaf::Number::many) abnormal (PATO:0000460) (Rosette leaf::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F18348

Determination of introduced cDNA(s)

RAFL09-37-J06 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-37-J06 - Resource: pda06162
full reading [+] show sequence
Nucleotide sequence: RAFL09-37-J06 - full reading

AGAGACGGTG ATCGGGAAAT GTCGACGAAA GGCGCGGCGG CGGCGTACCC
TAGCGCGGCT CGGATATCTG ATTCTCCATG TTATCTTCAG TACTCTGCTT
CTCTCAAATG TCTTGAAGAA TTTGGATCAG ACAAGAGTAA ATGCCAGGAT
CATTTTGATG TGTACAAGGA ATGCAAGAAG AAAGAGAGGG AAGCTCGACT
GGAACGCAAT AAGACACGGT CGTTGTTCTC GTGAATGCAG ATCCTCGAAT
ACCAATGATG TCTCAGAACA TCACCTAGCT AGTAGTATCC TGTTGTTTCA
TTTGCAATGG CTGTGTTTGT ATGATCTATC TAAGTAAACA AGTGGAAAGT
GTTTGTTAAT GTTACTTTTT ACTCCCCATT GGTGAATCAT GGTGTATACC
TGTTAAACTT TGAGAGCAAG TGGTTATTTA TTTAGTTAGA GAAAAAAAAA
AAAAAAA
Gene models with high sequence identity
1. AT1G02160.1 [+] show detail - Cox19 family protein (CHCH motif)
  E-value: 0; Score: 100.00
InterPro Scan Digest

See the detailed result >
AT1G02160.1

Model type

Protein coding

Short Description

Cox19 family protein (CHCH motif)

Computational Description

Cox19 family protein (CHCH motif); CONTAINS InterPro DOMAIN/s: CHCH (InterPro:IPR010625); Has 56 Blast hits to 56 proteins in 33 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 34; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

Link

InterPro Scan - TAIR