F19010

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F19010

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F19010

Determination of introduced cDNA(s)

RAFL16-10-G04 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL16-10-G04 - Resource: pda19393

full reading [+] show sequence

TTCTTCTCTC GATCTCGGAT TTTTCTGATC GATGGCGGTT CCCACACTCT 
GTATCGCCGA TGGAATCTAC CCCACTGCTT TTTTCTACCG GAATTCAGTC 
CGACGACTGA CCTCCGTCGC GCATGATCGG TTTACGAACC CGAAATTCGG 
AATCGATGGA CGTCTACGGA ACGGACCGAA GGTGACGGCA ACGGTGAATC 
CATATACGTA CACGGAGGCG GCGCAGCCCG AAGAGCGGAA GAGTTTGACG 
GATTTTTTGG TGGAAGCTAG AGATTTCGTT AGATCTGACG GCGGAGATGG 
TGGTCCACCT CGGTGGTTCT CTCCCTTGGA ATGTGGCGCA CGCGCTCCAG 
AATCTCCTCT TCTTCTCTAC TTACCTGGGA TCGATGGTAC TGGATTAGGG 
CTCATTCGCC AGCATAAGAG GCTTGGAGAG ATATTTGACA TATGGTGCCT 
TCACTTTCCA GTCACTGATC GTACCCCTGC TCGAGATCTT GTGAAGCTCA 
TTGAGAGAAC AGTTAGGTCA GAGTACTTCC GTTTACCAAA GAGACCCATA 
TACATAGTTG GAGAATCTAT TGGAGCTTGT CTTGCTCTAG ATGTTGCAGC 
CAGTAACCCT GACATTGATC TTGTCTTGAT TCTAGCTAAT CCAGTCACAC 
GTGTCAACAA CTTCATGTTG CAACCTTTAT CGAGTCTATT GGAAATTTTG 
CCAGACGGAG TTCCCAGCTT CCTGGAGGAG AATTTTCGGT TTGAACAAGG 
TTATCCGTTT GCAGCAATGT TCGAGACTAT GCTGAATGAA ACTGATGCCG 
CACAGATCGG TGGAGGGCTA TTAGGAGACC TCTTTGCAAC TTCAGTTAAC 
CTGCCGACTC TGGCTAGGAT CTTTCCAAAG GACACACTTC TATGGAAGCT 
TCAACTGCTT AAGTCTGCTT CAGCATCTGC TAAGTCTCAC ATGTACACAG 
TCAAAGCCCA AACACTTATA CTTTTGAGTG GACGCGATCA GTGGTTACTA 
AACAAGGAAG ACATTGAGAA ACTCCATTGT ACATTGCCGA ATTGTGAAGT 
CCGTAAGTTC GAGAATTACG GACAGCTTCT CTTTTTGGAG GATGGGGTAG 
ATCTGGTGAC TATCATCAAG TGTACTTATT ATTATCGCCG TGGAAAATTG 
CTTGATTACG TTTCTGATTT CATTCTGCCT ACCCCATTTG AGCTCAAAGA 
GTATGAAGAA TCACAAAGAT TGCTAACTGC TATAACCTCC CCAGTCTTTC 
TCTCAACTCT AGATAACGGT ACAGTAGTAA GATCACTTGC GGGAATACCT 
TCAGAGGGAC CGGTTCTCTA TGTTGGCAAT CACATGTTGC TTGGTACCGA 
ATTGCGTCCA GCAGCAATTC ATTTCCTGAA AGAAAAGAAC ATTCTGTTGC 
GAGGACTTGC ACATCCAGTG ATGTTTGCCA AAAAATATGG CTCAAAACTC 
CCTGATATGC ATATGTTCGA CTCAGTTAGG ATGATAGGCG CAGTTCCTGT 
CTCAAATATC AATTTCTATA AACTACTTCG CTCAAAGGCT CATGTGGTTT 
TGTATCCTGG AGGTGTCCGT GAAGCTTTGC ACAGAAAGGG TGAAGTATAC 
AAGTTGTTTT GGCCAGAACA TTCAGAGTTT GTAAGGACCG CATCTAAATT 
TGGAACAAAA ATCATTCCTT TTGGGGTTGT TGGTGAAGAT GATCTCTGTG 
AAGTGGTCTT CGATTACAAT GATCAAATGA AGATCCCTTT CCTGAAGAAT 
CTTATAAAAG AGTTATCACA AGACTCTACT TACTTGAGGA ACGGTGAAGA 
AGGAGAAGTA GGAAACCAAG ATTTGCATAT GCCTGGAATA GTTCCCAAGA 
TGCCGGGACG GTTTTACGTA TACTTTGGGA AACCAATTTA CACAGAAGGT 
AGAGAGGACG AGCTAAATGA TAAAGAGAAA GCTCATGAGG TTTACTTGCA 
GGTCAAGTCT GAGGTAGAAA GATGTATGAC CTATTTGAAG ATCAAAAGAG 
AAGGTGATCC TTATAGAAAC ATTTTAGCGA GGTCCCTCTA TCACTTCTCA 
CATGGTTTCT CTTCCCAAGT CCCAACCTTT GACCTCCGAA ATCAATAATT 
TTAGTTACTG GATTTGTGAC TTAATTAACT TTGTGGAATT TGGATATGTT 
ATTGTAACTT CTAAAAGTAC AAGGCTGTTG ATGTAGAAAT TGAGTAAGTT 
CGGGGTGTTA TGTTAAAAAT TCATGCAAAA AA

Gene models with high sequence identity

AT5G41130.1 [+] show detail - Esterase/lipase/thioesterase family protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Diacylglycerol acyltransferase	2e-07
Gene3D	no description	2.3e-07
HMMPanther	ALPHA/BETA HYDROLASE	0.00011
HMMPanther	ALPHA/BETA HYDROLASE RELATED	0.00011
superfamily	alpha/beta-Hydrolases	3.6e-17

See the detailed result >

AT5G41130.1

Model type: Protein coding
Short Description: Esterase/lipase/thioesterase family protein
Computational Description: Esterase/lipase/thioesterase family protein; FUNCTIONS IN: transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity, acyltransferase activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Diacylglycerol acyltransferase (InterPro:IPR007130), Phospholipid/glycerol acyltransferase (InterPro:IPR002123); BEST Arabidopsis thaliana protein match is: Esterase/lipase/thioesterase family protein (TAIR:AT5G41120.1); Has 500 Blast hits to 489 proteins in 151 species: Archae - 0; Bacteria - 285; Metazoa - 8; Fungi - 0; Plants - 158; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Link: InterPro Scan - TAIR