F19250

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F19250

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F19250

Determination of introduced cDNA(s)

RAFL06-73-M13 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-73-M13 - Resource: pda03457

full reading [+] show sequence

GTCATCAACC AAAGTAAGAA GCGCACACAC ACAACATATT TCTTTCACTA 
CCCAAAGAGA TGGCGACATC GGGAACATAT GTGACGGAGG TTCCATTGAA 
AGGATCGGCG GATAAACACT ACAAGCGGTG GAGAGATGAG AACCACCTCT 
TCCCCGATGC CATCGGCCAC CACATCCAAG GTGTCACTGT CCACGACGGT 
GAATGGGACT CTCATGAAGC CATCAAGATT TGGAACTATA CATGCGATGG 
GAAACCGGAA GTGTTCAAGG AAAGGAAAGA GATAGACGAT GAGAATATGG 
TGATAACGTT CAGAGGACTA GAAGGTCACG TCATGGAGCA GCTTAAAGTG 
TATGATCTCA TATATCAGTT CAGCCAAAAG TCTCCCGATG ATATCGTATG 
CAAGATCACA ATGATTTGGG AGAAGCGAAC CGATGATTCG CCTGAGCCTA 
GCAACTACAT GAAGTTCCTC AAAAGCGTTG TTGCTGACAT GGACGAGCAT 
GTTCTCAAAG CCTAAATCCC TTTCGAACCA TCGTCATCAC CTATCATCAT 
CATCATCATC ATCATCATAC ATCTCCCTTT GTGTGTGTAC TTGTATGGGT 
GTTTGAATCT TTCATTTGCG TAGTACAAAA TCATTTTTAA ATAAATTATG 
GTTTGAGC

Gene models with high sequence identity

AT2G01530.1 [+] show detail - MLP-like protein 329
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
Gene3D	no description	1e-18
superfamily	Bet v1-like	2e-34
HMMPfam	Bet v I allergen	1e-59

See the detailed result >

AT2G01530.1

Model type: Protein coding
Short Description: MLP-like protein 329
Computational Description: MLP-like protein 329 (MLP329); FUNCTIONS IN: copper ion binding; INVOLVED IN: response to biotic stimulus, defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: hypocotyl, root; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: MLP-like protein 328 (TAIR:AT2G01520.1); Has 358 Blast hits to 331 proteins in 39 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR