F19324

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F19324

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Original: F19324

Determination of introduced cDNA(s)

  • RAFL06-11-J07 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-11-J07 - Resource: pda03080

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-11-J07 - full reading 
    GTCCTGTTCT GATATCCATG GCTTTACCTT CGTGCTTAAA GACTGGAGCT 
    TTAATGTCTC CGGCCACTGG ATTTAATTTT TCCGGCAGTC TTATGAAGTC 
    AGACAGCGGC TTCGCCGTTC CGACAAAGTT ACAGAGTACT CGAAAAGGTG 
    ATCGAGAGAG ATTGAGAGTC CAAGCTATTT TCAGTTTCCC TCCTGCGTTT 
    CTGACAAGAA ACGGTCGAGC TGAGAAACAG AAACAGCTCA AACAAGAACT 
    TCTTGAAGCC ATTGAGCCTC TTGAACGTGG TGCTACGGCC TCGCCTGATG 
    ACCAGCTTCG GATTGATCAG TTAGCGCGTA AAGTGGAAGC AGTTAATCCC 
    ACCAAGGAGC CTTTGAAGTC TGATTTGGTC AATGGAAAAT GGGAGCTCAT 
    TTATACAACC TCTGCTTCGA TTTTGCAGGC AAAGAAACCA AGGTTCTTAA 
    GATCAATAAC CAACTACCAA TCTATCAATG TGGATACACT TAAGGTGCAA 
    AACATGGAGA CTTGGCCTTT CTATAACTCG GTAACTGGAG ACATAAAACC 
    CCTCAATTCG AAGAAGGTTG CTGTGAAACT CCAAGTGTTT AAAATTCTCG 
    GATTTATTCC TATAAAAGCA CCTGATAGCG CCCGCGGTGA ACTTGAGATT 
    ACCTATGTGG ACGAGGAACT ACGGTTATCA AGAGGTGACA AAGGGAACTT 
    GTTTATATTG AAGATGTTTG ATCCCACTTA TCGAATCCCT CTTTGATCTA 
    CCAAACAAAT GGTACCGAGC CATCCATCAT ACATACTTGC TACAACTTGC 
    TATGTCTCTC TTCATCATGT ATGTAATCTA ACATAAGAAA AATTAATAAG 
    AGGGAAAAAA TGAGAC

    Gene models with high sequence identity

    1. AT3G26070.1 [+] show detail - Plastid-lipid associated protein PAP / fibrillin family protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G26070.1

    Model type
    Protein coding
    Short Description
    Plastid-lipid associated protein PAP / fibrillin family protein
    Computational Description
    Plastid-lipid associated protein PAP / fibrillin family protein; FUNCTIONS IN: structural molecule activity; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, plastoglobule; CONTAINS InterPro DOMAIN/s: Plastid lipid-associated protein/fibrillin (InterPro:IPR006843); BEST Arabidopsis thaliana protein match is: plastid-lipid associated protein PAP / fibrillin family protein (TAIR:AT3G26080.1); Has 483 Blast hits to 479 proteins in 86 species: Archae - 0; Bacteria - 99; Metazoa - 0; Fungi - 0; Plants - 334; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR