F19348

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F19348

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F19348

Determination of introduced cDNA(s)

  • RAFL06-86-L08 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-86-L08 - Resource: pda03897

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-86-L08 - full reading 
    GTCTTCTTCT TTTTAACTTT CTTTTGTAAT CTCTTGTCTG AAAAAGAAAT 
    GGATCATGTA AGTTCAAGTG AGTTACTTAT TGATGATCTT CTTGAGGATT 
    ACTGGTTCTT TGAGAACTTA TTTACAAGAA GGTCGAGAGG CTTAAGGTAT 
    TGTCACTCAG ATCCTTACCC CTCTTCTTCT TCTACTTCGA CTTCTCCTGA 
    AAAAATGGGA GATTCAGATA TTGGGAAGGT TCTAGAAGCT TCCACAGGGC 
    GATCTTTAAT CAGGGCATCT TCTATAGATA GTAGAGAAGG CGGATCTCAG 
    ACGAAGCTGA CGGGCCGGTT CTCTGAAAAG ATTAGGGTTC AAGAACAGAG 
    ACAAGTTGGG TCTTCCTTGC AGAAGAAGGA ACATGTGGTT CTTCCTAAAT 
    CTGGATCTCG TTCGGCTCCG GGGAAGATTC AAGAAGCTTC CACAAAACGT 
    GGTTTGATCC GGGCACCTTC TTTGCCGCCT CAGATAGAAA AACGAGAGAT 
    GGACCGCGAG GCAAAGAAGA TGATCAATAA GCTGACAAGG CAGTTCTCTG 
    AGAAGATTAG GGTTCTAGAA CCGACGAGGC CTGGTGAGCA TTTCTTGCAG 
    AAAAAGGAAA CTATTGCTCG AGACAAAGGG ATTACTGAAA GTTCTAGAAG 
    CAACAAAACA GGAAGTAGCA GTAGTTATAG TAGTGTCAAG ATCAGTTTGC 
    AAAGAACTCA AACGATGCCA AATAACATGG GAAGAGAAGA AGATAACGAG 
    GAAGACGAGT TTGAAGATCA AGAAAGCGAC TCAAGAATGG GATTCTTGAT 
    CCGTGAAGCC CTGGCTAGTT CACATTATGT TCCAAAGGTT TCAAACAATC 
    AAAGGCAGAG ACCACCAAGA AGCTTGAGAT TAGAAGACAC TGCTATGGTC 
    AAACAAGGTG GCTCAAGTCC CAAAACGCTG CGTAAAACGT TAAGCAGCGT 
    AGAAACAACC AAAGAGATTC AAAGGCTGAA AGGTTATGAC CAACTGGTCG 
    AGCCACGTGT CGCAAGTGGA TTAGCTACAC CACCTAGGGT TCCAAAGGAT 
    TCAAGTAAAG AAATGAAGGA TCAGATCAAG TTTTGGGCTC GAGCCGTAGC 
    TACTAATGTC CGACAAGAGT GCTAAGATTT TTCTTACACT AATTAACTGT 
    ATTTCGTACA GATGATTCTT ATCTTGAACT CTTTTGTGTG TTTTGTTTTT 
    CTGATCCTCC TGAAATAATG AGATTCCTCT GTTTATGTGA CAAAAAAAAA 
    AAAAAAA

    Gene models with high sequence identity

    1. AT1G53180.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G53180.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15115.1); Has 58 Blast hits to 56 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR