F19747

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F19747

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F19747

Determination of introduced cDNA(s)

  • RAFL05-01-O08 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-01-O08 - Resource: pda00878

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-01-O08 - full reading
    TCCGGAGGAG CGACCAATAA GAGCGCGAGG AGCTTCCACG TGTTACTACA 
    CGAATCTTGT TTAGTAAAAA GCGCAGCTGC AAAAAAAATC GAGTAGAGAA
    GAAGTAGGCA GACAAAGAAG AAGAAGAAGA AGTTCTCGGC GTGCTTCAAT
    GGCGATATCA GTAGCAGCTT CGTCCTCTAT GGCCGTGATG GTTCCACGTG
    TTCCCGCCGT ATCCACCCGT TGCTCCGCCG TCCCTTATCT TCCTCCTCGC
    TCCTTTGGCC GATCCTCTTT CACCGTTCCG TTGAAGCTTG TTTCAGGGAA
    TGGATTGCAA AAAGTTGAAT TGTTGAAGAC AAGAGCTTCT TCAGAAGAGA
    CCTCGTCCAT TGATACCAAC GAACTCATCA CAGATTTGAA GGAAAAGTGG
    GATGGTCTTG AGAACAAATC TACTGTACTT ATATATGGAG GAGGAGCCAT
    TGTTGCTGTT TGGTTATCTT CCATTGTTGT TGGTGCCATC AACTCTGTTC
    CTCTGCTTCC GAAAGTTATG GAACTTGTCG GTCTCGGGTA CACTGGATGG
    TTTGTCTACA GATACCTTCT CTTCAAGTCA AGCAGAAAGG AATTGGCTGA
    GGATATTGAA TCCTTGAAGA AGAAGATCGC AGGAAGCGAA TAGATTCATT
    TTCAAATAAA ACCAGCTTTC TCTCTGTATG TTTTCCTGTA ATATCGTGTT
    ATATTATACA ATGTCTCTGT TTCAACATTG TATCTGTTGC ATCTGAAACT
    ATTATCTTGG ATCCG

    Gene models with high sequence identity

    1. AT4G01150.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G01150.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38100.1); Has 323 Blast hits to 323 proteins in 59 species: Archae - 0; Bacteria - 107; Metazoa - 0; Fungi - 0; Plants - 206; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR