F20101

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F20101

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) abnormal (PATO:0000460) (Rosette leaf::Others)
	sporophyte vegetative stage (PO:0007134)	decreased speed (PATO:0000304) (Adult plant::Growth::slow)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F20101

Determination of introduced cDNA(s)

RAFL06-69-F17 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-69-F17 - Resource: pda03324

full reading [+] show sequence

TCTCTCTCTC CGGCGCTAAC GGGATGTCCT CACCATAACG CCGTTAAGTC 
TGGAACCCGT TTGAACGGAA TTATCAAAAC GGGAAGGAAT ATTCCGTTTG 
AATGGCTCTG GAACAGTTAG GATTAGGAGT GAGCGCCGTT GACGGTGGAG 
AGAACAGTAG CGCGCCGTCA AATGACGGTG GAGATGACGG CGTTAAGACG 
GCGAGACTTC CTCGTTGGAC GAGACAAGAG ATTCTGGTTC TGATTCAAGG 
GAAGAGAGTG GCGGAGAACA GAGTCCGGCG AGGGAGAGCG GCGGGTATGG 
CTCTCGGGTC GGGTCAAATG GAGCCTAAAT GGGCTTCTGT TTCGTCTTAC 
TGTAAACGTC ACGGTGTAAA TCGTGGGCCG GTTCAGTGCC GGAAAAGATG 
GAGCAATCTC GCCGGAGATT ATAAGAAGAT TAAAGAATGG GAGTCTCAGA 
TTAAGGAAGA GACTGAGTCC TATTGGGTTA TGAGGAATGA TGTTCGTAGA 
GAGAAGAAGC TTCCTGGTTT TTTCGATAAG GAGGTTTATG ATATTGTTGA 
CGGTGGTGTG ATTCCTCCGG CGGTTCCGGT TCTTTCGCTT GGATTGGCTC 
CGGCGTCAGA CGAGGGATTG TTGTCTGATT TAGATCGGAG AGAAAGTCCT 
GAGAAGTTGA ATTCTACTCC GGTGGCTAAA TCAGTTACTG ATGTTATAGA 
CAAAGAGAAG CAAGAAGCTT GTGTAGCAGA TCAAGGTAGA GTGAAAGAGA 
AACAGCCAGA AGCAGCAAAC GTGGAAGGTG GATCGACATC ACAAGAAGAG 
AGGAAGCGTA AACGGACATC TTTTGGTGAA AAGGAAGAAG AAGAAGAAGA 
AGGAGAAACA AAGAAGATGC AGAATCAGTT GATAGAGATA CTAGAAAGAA 
ACGGGCAGTT GTTGGCGGCA CAGCTTGAGG TTCAGAATTT AAACTTAAAA 
CTAGACAGAG AGCAAAGAAA AGATCACGGT GATAGCTTAG TCGCTGTTCT 
CAATAAGCTC GCTGATGCTG TGGCAAAAAT CGCGGATAAG ATGTAGATTT 
AGTAAAAGTT AGTTGTATAT CACTTTGGCC ATTACTTCTC ATTCTTCTTC 
TTCCTTTTTT TTCAATCATT TATCACCATT GTTGATTGAA TATTGATGCC 
ACCACAAGAG GTTATTATAC ACATCTTATA TAAACATTGA GATTAAGAAA 
AAAAAAAAAA AAA

Gene models with high sequence identity

AT2G33550.1 [+] show detail - Homeodomain-like superfamily protein
E-value: 0; Score: 99.92

InterPro Scan Digest

See the detailed result >

AT2G33550.1

Model type: Protein coding
Short Description: Homeodomain-like superfamily protein
Computational Description: Homeodomain-like superfamily protein; CONTAINS InterPro DOMAIN/s: MYB-like (InterPro:IPR017877); BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G31270.1); Has 743 Blast hits to 735 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 25; Fungi - 8; Plants - 568; Viruses - 0; Other Eukaryotes - 142 (source: NCBI BLink).
Link: InterPro Scan - TAIR