F20118

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F20118

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F20118

Determination of introduced cDNA(s)

  • RAFL04-16-B20 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL04-16-B20 - Resource: pda00574

    full reading [+] show sequence

    Nucleotide sequence: RAFL04-16-B20 - full reading 
    ACCATTCAAA TTGATTGAGT TTGTTATACA AAAAAAAAAG AGAAGAAGAA 
    GCCAGAAGTC TGAGAGTTTT ATAAGTAACG AAAATGAAAT CGACCGTCAT 
    GATGATTTTC CTCATTATCT ACCTCCTCAT CGCCGTGCCT TGCTTCGCTA 
    AAGGATCGGA GCAAACGGAT TCAGAGGTGT ACGAGATCGA TTACAGGGGA 
    CCAGAGACTC ATAACTCTAG ACCTCCACCG GAAACTATGC ACGGCAAGCC 
    ACCGTACATC CACCATAATA CCTCCGCCGC TGGGCTCGGT GCTCATGTAG 
    GAGGAAAGAA CTAGAGAGAG AGCGAGACCT TTTCCAAGGA GAAGACTCAG 
    AAGTTGAAGA GGAAGATTAC GAGAGTTGTG ATATATATAT GAGTAATTAA 
    TGATGTTAAT TGATACAAAT TTATACTTTA ATTATTTATC ATATGAAGAT 
    GATCATCGAT GTGTGATCAG TACAGTTAGT GTGAATAACA CACTACTCTC 
    CTGATGTCAT GTCCGGTCTT TTATTTATTT CATTTTTCAA TTCTCATGCA 
    CCGTTCTCTA TATCATTTTT TTCG

    Gene models with high sequence identity

    1. AT5G03120.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G03120.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 14 Blast hits to 14 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR