F21005

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F21005

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F21005

Determination of introduced cDNA(s)

  • RAFL09-41-P09 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-41-P09 - Resource: pda08336

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-41-P09 - full reading 
    GAGTACAACA CTTCTTCTTC TTCTCTCTAA GTCCAGTTAA AAATCATCTC 
    TTTGCAATGT TGACTCTTTA ATCTTCGATT TATAAGCTCT CGAAGGAATC 
    TATTACCTTC AATCTCTCTC GTTGTTAGCT CTTTGAATTG TAGAAGAGAA 
    TGGGTTGCTT ACTTGGTTGC TTCGGTCGTC GGAAGAATCG TCGCCGTCAG 
    AGACGCAGAG AATCTTTTCA GCCACGTTTA AACAGAATCT CTGAGGAAGC 
    TGCAAAGGAT GTTCTTTTGA ATCTTAGGGT TCCTACTGTT GAAGAAGTCC 
    CAAAGTATGC AAAAGATTCA ACTGTTATGG AAGTCCCTAA AATCTCGGAG 
    GTGTCTCCAA AGGATAATCA TGTGAACGTT GTTGAGAAAG TCCCTACAGT 
    TTCTGTAACT CCGATCACTG ATATCTGTGA CAAGGTTGAG GAGAAACAGA 
    GTCCGAGTCC AAGTCCAAAT CGTAAGAGAG TAACTTTTGA CACCAATGTT 
    AAAACATATG AACACATTGC AGTAGATGAA TCTGTTGAGC TCTTTGAAGA 
    GAAGAAAGAA GAGGTGAAGT CGAGGCAGGC TCGATGTTCG TCTGAAGGGA 
    GCGATGTTAC TTCTAACTCG TCAGGGTCTT ATCCTTCTAA CCATAGATAT 
    CAGAATTGCA GAGAGAGTGA TGATGAAGAG GAGGATGTAA CGGATTGTGA 
    CGATAGCGAT CTTGAGGATA CTGATGATGA TGATTGTGGG CTGCTAGATG 
    ATGACTATTA TAATGATGAC AATTATGAGG ACAAGCTGCA CAACTGGGAT 
    AAAGTAGTTT ATACGGAGGA GATTGCGGAT AATGTTATGG ATATAGAGAG 
    GGTTGAAGAA AAGGGTAGTG TGAGTGTTAG AGACAGAAGT GGATATGTCA 
    ATGCAGTACT GAACCCGATT GAGAATCTTT CCCAATGGAA AGCTGTGAAA 
    GCCAAAGGAA GAACAACAAC TCAAACACAG CCTCGGAAGG AGAATGTGAT 
    AATTGCTTCC TTCAGCTTGG AGTCTCAGGT TGATGATTTA TCATCAACAT 
    TCAGCTTGAA CCGGAAATCA AGAGATGAAA CTGAGAAACA GAGAACTCAA 
    GAAATAGCTG TTGATGCTAG TCTTTCAACT TGGTTATCCA CATCACAAAC 
    CACGACCAGC GGTTGTAGCA GTGTTGAAAC CACAATGTCC GAGAAGAAGA 
    AATACTCGAA ACTGGTTCAA TGCCATGATG AAAGACCTAT ATTGGGCGCG 
    TTAACTGCAG AGGAGATAAA GCAGTTCTCA GCTACGAATT CGCCAAGGAA 
    ATCGCCAAGT AGAAGCCCTG AATCACCGAT AATTGGAACA GTTGGTGGTT 
    ACTGGAACAG TCACTCAATG GCAACGAACA AGTACAGTCG AAGTTCTTAG 
    AACTCCAATT CCACAACAGA GAAAGAATTC CACACATGTT TGGTTACTAC 
    ATTGCCTTTG TGAAATTATT TTTATCACTC TGTTTGTTTG TGTGTGTGTG 
    GTTGATAACA AAATCGTTGT GTTTTGTGTG TGATTTGATT TAGTAATATT 
    CATTCTATTT GTTTGTATTT TACAGAAATT TGTCTACTTT ATTTCACAAG 
    TGAATCAAAG TTTTGTATTT TTTTTCCT

    Gene models with high sequence identity

    1. AT5G44040.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G44040.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04030.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR