F21224

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F21224

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F21224

Determination of introduced cDNA(s)

  • RAFL09-32-C09 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-32-C09 - Resource: pda05898

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-32-C09 - full reading
    ACATATCCGC CATTGTTTCC GGCAACGCAA ACTACCAAAA AAAATAATGG 
    AGGTCGAAAG AGTCCAAGAC ATTTCATCTT CTTCTCTACT AACAGAAGCA
    ATCCCGTTGG AGTTCATCAG ATCAGAGAAA GAACAACCAG CGATCACAAC
    ATTCCGAGGT CCAACGCCGG CGATTCCCGT CGTCGATCTA AGCGATCCCG
    ACGAAGAAAG CGTGAGGCGC GCGGTGGTGA AAGCGAGTGA AGAATGGGGG
    CTATTCCAAG TGGTTAACCA CGGGATTCCG ACGGAGCTGA TACGACGTTT
    ACAAGACGTC GGAAGAAAAT TCTTCGAGCT TCCTTCGTCG GAGAAAGAAT
    CCGTCGCTAA ACCGGAAGAT TCGAAAGACA TTGAAGGATA CGGAACAAAG
    CTTCAGAAAG ATCCAGAAGG TAAAAAAGCT TGGGTCGATC ATCTCTTCCA
    TCGAATCTGG CCACCGTCAT GCGTCAATTA CAGATTCTGG CCTAAGAATC
    CACCTGAATA CAGGGAGGTG AATGAAGAGT ATGCAGTGCA TGTGAAGAAG
    CTATCGGAGA CGTTATTAGG GATTCTCTCG GATGGATTAG GGTTAAAGCG
    TGATGCGTTG AAAGAAGGTC TCGGCGGAGA GATGGCGGAG TATATGATGA
    AGATTAACTA TTATCCGCCG TGTCCTCGGC CGGATTTAGC TTTAGGTGTA
    CCGGCTCATA CAGATCTCAG TGGAATCACT CTTCTTGTTC CTAACGAAGT
    TCCTGGACTT CAAGTTTTCA AAGATGATCA CTGGTTCGAT GCAGAGTATA
    TTCCCTCCGC CGTCATTGTT CACATCGGCG ATCAGATTCT GAGGTTGAGT
    AATGGGAGGT ATAAAAATGT GTTGCATAGG ACGACGGTGG ATAAAGAGAA
    GACGAGGATG TCGTGGCCGG TTTTCTTGGA GCCTCCCCGT GAAAAGATTG
    TTGGACCTTT ACCGGAACTA ACCGGAGATG ATAATCCTCC AAAGTTTAAA
    CCGTTTGCTT TCAAGGATTA CAGTTACCGC AAGCTCAATA AACTTCCTCT
    GGATTGAGAA AAATCAATAC GAGAAGAATA ATTTGTGGTT GTGGAATAGG
    AAGTGGTTCG TTATTGAGTT GTTGTTTTCC CGCGGTTGTG TCTCTTGCTT
    ATTGTTATTT TATGTTTAAA ATAAAGATTA AAACATCTAC CTACATTGTG
    TGTGATGTTG ACATGTTTTT ATTGTGTTGC GATGCCTTTG CAAGTTATGT
    CGGACCATTT TTAGGCATTG GAAAGAGTAG GTTTGTATTT TGTAAATTTT
    TAACCTGTCA CGGAAAAAAA TCGGTGATC

    Gene models with high sequence identity

    1. AT5G08640.1 [+] show detail - flavonol synthase 1
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    Gene3D no description 7.7e-101
    HMMPanther FLAVONOL SYNTHASE 6.6e-213
    HMMPanther IRON/ASCORBATE-DEPENDENT OXIDOREDUCTASE FAMIL 6.6e-213
    HMMPfam Oxoglutarate/iron-dependent oxygenase 1.9e-22
    superfamily Clavaminate synthase-like 1.5e-102

    See the detailed result >

    AT5G08640.1

    Model type
    Protein coding
    Short Description
    flavonol synthase 1
    Curator Summary
    Encodes a flavonol synthase that catalyzes formation of flavonols from dihydroflavonols.
    Computational Description
    flavonol synthase 1 (FLS1); CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: flavonol synthase 3 (TAIR:AT5G63590.1); Has 8476 Blast hits to 8432 proteins in 992 species: Archae - 0; Bacteria - 1104; Metazoa - 92; Fungi - 925; Plants - 4948; Viruses - 0; Other Eukaryotes - 1407 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR