F21418

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F21418

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F21418

Determination of introduced cDNA(s)

  • RAFL07-09-K22 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL07-09-K22 - Resource: pda04039

    full reading [+] show sequence

    Nucleotide sequence: RAFL07-09-K22 - full reading 
    TCTTGTCCTG ATCTTCTTCT TCTTTCTTCC CAGTTTCTCT CTTCGAGCTT 
    CCGGAATCTT TGGTGATCAC CGACCGGATC TGGACGAAGA ATCTCGTTAA 
    CAAACTCAAC AAGCATTCTC CAAAGCTTCC TCCTTTTTCT TCAACGATCG 
    TCATTGCATT GTAATTTGGA GAGTTTAGCT ACAAAGTCTG TCTTCATCGA 
    ATTAAGATCT ATCTGATTTT TCTGGGTGGT TCTCATGTGT GAGATTTTTG 
    ATGGGTTTAG AGTTGTCGGA TATGGAAGGT TCTTCTTATC TTTGATTTGT 
    TTTATATATT AAGCGGCAGA ATTTGAGGTT GACTTGAGCG AGAATCTGGA 
    TTCTTTCGAG GAGTATTTAA TGTTCCTGAG AATTCCCTGT TTTTGCGTCA 
    AGTTTTCATT TTTCTGAGTG TTAATAAATT TAGAATCATT AGTGCAGCAG 
    ATAGAGAGAG AGTGTGTAAA TCTGAGGAAG ACTCTCTGTG GATTTGATTC 
    GTCTTTGTGA GTCAGGAATC TGTTTGATGA AATTCCCCTG TGGAGAGTTT 
    TAGGATTTTA GAAAATGTGT AAAGCGGAGA AGTTTCTTTA TCACAGGAAA 
    CTCTGGGAGA TGAAGGTTAA GTTTCTAGGA GATAGTAAGA TTGACAAGCT 
    TAAGAACTCC TTGGTTTTGA GGTCTCGTAT GAGCTTATGG ATGATTCGTG 
    CTATGACTAT ATTGTTGCTA TGGAGTTGCT TTGTTCATTT GGTTGCTGTG 
    GGAGAGATGT GGGGACCTAG ATTGTTGAAA GGCTGGCCTT CTTGTTTCAA 
    TCACCATGAC TTCCCCATTG CTGCAGAAAT GACTTCTCTT CCCATGAAAA 
    TCGCCCTCCC ACCTAAAAGG ATATATCAGA ACAATGGCTA TCTTATGGTT 
    TCTTGCAATG GAGGACTCAA CCAAATGCGA GCAGCGATAT GTGATATGGT 
    CACTATTGCA AGATACATGA ATGTCACACT TATTGTCCCA GAGCTTGACA 
    AGACCTCGTT TTGGAATGAT CCAAGTGAGT TCAAAGACAT ATTCGACGTG 
    GACCATTTCA TAAGTTCTTT AAGGGACGAG GTTCGTATAC TAAAAGAGCT 
    TCCTCCAAGG CTTAAGAGAA GGGTTAGGCT CGGGCTGTAC CACACCATGC 
    CTCCTATTAG CTGGTCCAAC ATGTCCTACT ACCAAGACCA GATTCTTCCG 
    CTGGTGAAGA AGTATAAGGT GGTACATCTG AACAAGACCG ATACTCGACT 
    TGCTAATAAC GAACTACCTG TTGAGATTCA GAAGCTGCGA TGCCGAGCAA 
    ATTTCAATGG GCTTAGGTTT ACTCCAAAGA TTGAGGAATT GGGTAGAAGA 
    GTAGTCAAGA TTCTCAGGGA GAAAGGTCCC TTTCTAGTTC TGCATCTCAG 
    ATACGAAATG GATATGTTGG CATTTTCTGG TTGCTCACAT GGTTGCAACC 
    GCTACGAAGA GGAAGAACTA ACAAGAATGA GATATGCTTA TCCGTGGTGG 
    AAAGAGAAAG TAATAGACTC CGAGTTGAAG AGGAAAGAAG GTCTTTGCCC 
    ATTGACTCCT GAAGAAACAG CTCTTACGCT ATCTGCATTG GGTATTGACC 
    GAAATGTTCA GATTTACATA GCTGCAGGAG AAATATACGG TGGTAAAAGG 
    CGGTTAAAGG CTTTAACAGA TGTTTTTCCA AATGTGGTGA GGAAAGAAAC 
    TCTACTCGAT TCTTCTGATT TGAGTTTTTG TAAAAACCAT TCTTCTCAAA 
    TGGCTGCTCT TGATTACCTT ATCTCTCTCG AAAGTGATAT ATTCGTTCCT 
    ACTTATTACG GAAACATGGC GAAAGTCGTG GAAGGTCATC GCAGGTTCTT 
    GGGGTTCAAG AAGACAATTG AGCTAAACCG GAAGTTGTTG GTTAAGCTGA 
    TAGATGAATA TTATGAAGGA TTGTTGAGCT GGGAAGTGTT TTCAACCACG 
    GTTAAGGCCT TTCACGCTAC ACGAATGGGA GGGCCAAAGA GACGGCTAGT 
    GATTCCAAAT AAACCGAAAG AAGAAGACTA CTTCTATGCT AATCCATATG 
    AATGTCTTCA GCTATTACAT GAGAATAATG GCAATTCACT AGAAGAAACC 
    TAATAAACAG ATCCTCCAAT GTTGTCTTTC GTGGGGGTGA TGCAGGACAT 
    GGATGGAGTT ATCTAATGGG AATGATATAT CCATCTGGAA GATTAGGTTT 
    CTTAAAGAGA TGAGAAGTTA TTTAGGGTTC TTTGGTGTAC AGAGATATCT 
    GAAGAGCTTC AGTTGATGCA GAAGAAAGGT TGAAGCTTTC AGGGTCATGT 
    TTGCAAATTT GTCCTATGCC ACCTCAGTCA TCATCATCCA TGGCCTTGCA 
    GTTTTGGTAG CTAAAAAGTA AAATGCAGTG TAAAATTATA TCACACATAT 
    GATTATCATT ATTATTATTT TACAAAATAA ATAATTATTC TAAAAAAAAA 
    AAAAAA

    Gene models with high sequence identity

    1. AT3G02250.1 [+] show detail - O-fucosyltransferase family protein
      E-value: 0; Score: 99.96

     

    InterPro Scan Digest

    See the detailed result >

    AT3G02250.1

    Model type
    Protein coding
    Short Description
    O-fucosyltransferase family protein
    Computational Description
    O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT5G15740.1); Has 830 Blast hits to 821 proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 830; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR