F21725

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F21725

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F21725

Determination of introduced cDNA(s)

  • RAFL09-12-L09 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-12-L09 - Resource: pda01667

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-12-L09 - full reading 
    GATCGCATGT GGTAGTTCCT TTTTGGATCA GTGGTTTTTG AAATGGAGAA 
    AGTTTCGTCG CCGTCTTCCT CTTTTTCACG GAGGTCTGCT TATCTTGAAG 
    CTCTTACACA AGAGATTAAG AAGAAGCTTA CACGGGCTGT TGTCTCTCCA 
    GCACAAACAC GCAACTTGTT ACAAGACTTA TTTGCTGATA TAGCTCTCGA 
    AGTAGACGAT CGAGCCAAAG ATGTGATCCT TAGCAAAGAA GAGGATTTGA 
    TTACTTCTGA TGAAGCAGAT GCTGATGGTC CGTTATGCTT TTTCGATGTC 
    CTTGCTGATT ACTATGTGAA AGTGTCTGAG AGGGGGAAGG ATATACTTGA 
    TTTGATGGTG CAGCTGTGGA GCCAGTCCTT TGCATCACAT ATATTCTCTC 
    TACTGTTCCA TAAATGGCTG TTTGAGGTTG AGCTTGACAA TCAAGAAATA 
    CTCCTGCGAT ATTCTTCGGC TCTGGTGCAG GGAGCAACAA ATGTGTTCTG 
    GATAGACATC CAGACAAATA CGAGGCGCTT CCAAAGTCTC TTTCGGTATC 
    TCCTTGAGGA AGTTGCTTTG GAGCAGATAC GATTGAAAAA ATTCCCATTC 
    AGGCTCAGAG GGAACTGTAT CTCTTACTCT CTAGGTTCAT TTTCTTTTAC 
    AATTCAGTGG ATAAACTCGA TAGCTTCTTG AGGAACTTCC CAGAGTTTCC 
    AAATGCTTTC TTGATTGGAG GACCTGGAGA TTTCCTTGTT ATCGAACTAA 
    CTGATCAGCT GCAAAAACTG AAGGTGGAAC CAGTGCTGCT ACATTATCTT 
    TCTCAGATGA AGATTCTTCA AGGTATGGAA CTGAGAATGA CTACTAGCAC 
    AAGGTTAAAG GCGTGTTTAT ACAGTTTTAC CTCTCCTGGA GGTCCAATGT 
    ACCCGACAAG AGCCGTCCGT CATGCAGCCT GGGATGCTTT GGATTCCCTC 
    TTTCCTGTTG GGCGTTACCC GAGGCATCTC ATTAGTCTAT TTTTCAGGCT 
    GCTATATCCG TGGTACTGGC CATCCTCATG CTGGAACTTT GTGGTTTCTT 
    GCATTAAGGC GGTACTCTAT TCTATCGTAA GGCTCATCTT TTCACGGCGA 
    GAAAAGCCAA GGCAGAGCTG AATAGCTTTT ACTTTTGATG AAGCTTACAG 
    CAGGAATCCA ATCCTTGTGT ATATAATGTG GTTTTGGTCA AAGAGGCAAA 
    CCAGTGAACC TTACCTTCAC CTGTATTACT GTCTACAGAG AAGATAAACT 
    CCGTTTTGTG AAAGATCCCA TGGATAAGCT TTTGACTTGT TTTGTTGTCA 
    TTGGTAAAAT TGTTATTTTG CTATAGAGGA CGTGTATTGT GTCCAGAAAC 
    CCTTCTTGTG TAGAAGATAA ACCATTTCGG CCTTCTGTTT TAGTTGTATT 
    GGATCTGTAA GAACTAAGAA CCCTTAAACT TTTCACCATT CATGGACCAT 
    GATATCATCT

    Gene models with high sequence identity

    1. AT5G59960.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 99.93

     

    InterPro Scan Digest

    See the detailed result >

    AT5G59960.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR