F21731

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F21731

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F21731

Determination of introduced cDNA(s)

  • RAFL05-15-H10 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-15-H10 - Resource: pda17091

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-15-H10 - full reading 
    GAATCGCTGG ACTCTGCTAC TGCGAAGAAC AACAAATTCC TTGTTTATCA 
    TGGCGAATTC CGGCGAAGAG AAGTTGAAGC TCTACTCTTA CTGGAGAAGC 
    TCGTGTGCTC ATCGTGTCCG TATCGCCCTC GCTTTGAAAG GGCTTGATTA 
    TGAGTATATA CCAGTGAATT TGCTCAAGGG TGATCAATTC GATTCAGTTT 
    ATCGTTTTGA TCTTCAAGAT TTCAAGAAGA TCAATCCAAT GGGAACTGTA 
    CCAGCTCTGG TGGATGGAGA TGTTGTGATT AATGATTCTT TTGCGATAAT 
    AATGTATCTG GATGAGAAGT ACCCTGAGCC ACCTTTGTTA CCTCGTGACC 
    TCCATAAACG AGCTGTGAAT TACCAGGCAA TGAGTATTGT CTTGTCTGGC 
    ATACAGCCTC ATCAAAATCT GGCTGTTATT AGGTATATCG AGGAAAAGAT 
    AAATGTGGAG GAGAAGACTG CCTGGGTTAA TAATGCTATC ACAAAAGGAT 
    TTACAGCTCT CGAGAAACTG TTGGTGAATT GCGCTGGGAA ACATGCGACT 
    GGTGATGAAA TTTACCTGGC TGATCTCTTT CTAGCACCAC AGATCCACGG 
    AGCAATCAAC AGATTCCAGA TTAACATGGA ACCGTACCCA ACTCTTGCAA 
    AATGTTACGA ATCATACAAC GAACTGCCTG CGTTTCAAAA TGCACTACCG 
    GAAAAGCAGC CAGATGCTCC TTCTTCCACC ATCTGATTCT GTGAACCCAT 
    AAGCTACTCT CACTTTAATA AAACCTCAGA CAACAACAAC AACAACAATG 
    ATAATAATAA TACCTTGTAC TCATACATGT ATCATATAAA CCAGTTACGT 
    ATATTATACC ATCTCAATTG GAGGTATCTC ATAAGAGTTT CTCACTAAAA 
    AAAAAA

    Gene models with high sequence identity

    1. AT2G02390.3 [+] show detail - glutathione S-transferase zeta 1
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    superfamily Glutathione S-transferase, C-terminal-like 2e-32
    superfamily Thioredoxin-like fold 2.5e-31
    ProfileScan Glutathione S-transferase, N-terminal 30.67
    ProfileScan Glutathione S-transferase/chloride channel, C-terminal 21.58
    HMMPanther GLUTATHIONE-S-TRANSFERASE THETA, GST 2.9e-66
    HMMPanther GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, 2.9e-66
    HMMTigr Maleylacetoacetate isomerase 1.5e-105
    HMMPfam Glutathione S-transferase, N-terminal 0.000000000000031
    Gene3D Thioredoxin fold 4.6e-26
    Gene3D Glutathione S-transferase, C-terminal-like 2.8e-44

    See the detailed result >

    AT2G02390.3

    Model type
    Protein coding
    Short Description
    glutathione S-transferase zeta 1
    Curator Summary
    Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide.
    Computational Description
    glutathione S-transferase zeta 1 (GSTZ1); FUNCTIONS IN: glutathione transferase activity, catalytic activity; INVOLVED IN: toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Maleylacetoacetate isomerase (InterPro:IPR005955), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class zeta) 2 (TAIR:AT2G02380.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR