F22150

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F22150

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F22150

Determination of introduced cDNA(s)

RAFL05-05-A20 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-05-A20 - Resource: pda00777

full reading [+] show sequence

AATCTCCCTC TTTACTTTTT TTCTTTCATC ATATAAAGGG TTGGTGAAAT 
ATGAATGGAA TCCAATTTCG TTGGGAGGTT GTTGTATATT ATAAGTTTTT 
AGTGTCTAAT CTTTTTGAAC TATTTGTTGA AATTAAGGTG TAAAGTTGTT 
CCATTCATCA AAAAGCTATG GATTTCAATA GAAAAGCTCA TCCAGATTGC 
GTATATGCGG ATAATCCTTT CCATGAATGT GCTTCAGCTT GTTTAGAGAA 
AATTGCTCAA GGCCATGTCA AGAAGAACAC TAAGAAGCAA AGTTCAAGGC 
TTCTTAGCTT CTCAGGGAGT TTCGGTAGGA AAAAGAAGGA GTCGAATTCA 
CAACCGCCTA CACCGCTATC CGCAAGGCCT TATCAAAACG GCAGAGGCGG 
TTTTGCAAAT GGTAATTCCC CAAAGGTTCA TCATTCTGTA GCTCCACCTG 
CTTCCGTGAA GAAGAAGATT GTTTCTGAAA CGAAAAATTC TTTCACTTCT 
TCATCATCCG GTGATCCGGA TGATTTCTTC AACCATAAAC CAGAGAAGAA 
ACCTTCTCAA ACCATTCCCC TTTCATCAAA CAATTTGGTT GATCAAAGCA 
AAGTGGTATC ACCTAAACCG GGAATACAAG AACACAATGG GAAGATTGGA 
GAAGGCGGCG AAACTAGACT CTTTAGTTTC CTAAGCCTTC CAAGATCGCC 
TGGAAAAGAG AGCAATGATG ATTTTTCTGA TGATGATGAC GAAAACAACA 
ATGAGATTGG TGTAGAGCTC GATCTCGAAT CAGTAATGTC TGACACTTTT 
GTCTCTGTCG GGAAATACCG AGTCAGATCG GGTTCATCCA CTATACTAAG 
TGCTGTCATC GAAAAGCACG GAGACATTGC TCAAAACTGT AAGCTGGAAT 
CGGATTCAAT GCGATCACGT TACCTCGAGT GTTTATGCTC ACTGATGCAG 
GAACTTAGGT CAACCCCGGT AGGGCAGTTG AGCAAAGTCA AGGTCAAAGA 
GATGCTTGCG GTTCTCAAAG ACTTGGAGTC TGTGAACATT GAAGTAGCTT 
GGCTACGTTC TGTTCTTGAA GAGTTTGCGC AGTCTCAAGA AGATGTAGAA 
AATGAGAAAG AGAGGCATGA TGGTTTAGTG AAGGCTAAGA GAGAAGAGCT 
TGAGGCTCAA GAAACGGATT TGGTTAGGAT GGAGAAGGAA GTGGTGGAAG 
TGAAGCGGCG GATTGAGGAG ACGCGGGCTC AGATGGTTGA GATCGAAGCA 
GAACGGTTGA GGATGGAGAA AATGGGATTC AAAATGGAGA AATTTAAAGG 
GAAATCGTTT ATAGATGAGC TTCTGTGAGT TTGAGTTGTG TGTGATGTTG 
TTAGTAGTAA GCCAAGGGTA GTAGGTAATA GCACAAAATC AAAAATGCTC 
TAATAAATGA GTTTTTAAGG TT

Gene models with high sequence identity

AT4G35110.1 [+] show detail - Arabidopsis phospholipase-like protein (PEARLI 4) family
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Phospholipase-like, arabidopsis	1.6e-82
Coil	coiled-coil	0
Coil	coiled-coil	0
HMMPanther	PEARLI 4-RELATED	4.7e-288
HMMPanther	NIPPED-B-LIKE PROTEIN (DELANGIN) SCC2-RELATED	4.7e-288

See the detailed result >

AT4G35110.1

Model type: Protein coding
Short Description: Arabidopsis phospholipase-like protein (PEARLI 4) family
Computational Description: Arabidopsis phospholipase-like protein (PEARLI 4) family; CONTAINS InterPro DOMAIN/s: Phospholipase-like, arabidopsis (InterPro:IPR007942); BEST Arabidopsis thaliana protein match is: Arabidopsis phospholipase-like protein (PEARLI 4) family (TAIR:AT2G16900.1); Has 682 Blast hits to 587 proteins in 127 species: Archae - 27; Bacteria - 57; Metazoa - 143; Fungi - 39; Plants - 275; Viruses - 32; Other Eukaryotes - 109 (source: NCBI BLink).
Link: InterPro Scan - TAIR