F22436

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F22436

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
cauline leaf (PO:0000013)
  • increased size (PATO:0000586)
    (Cauline leaf::Shape::large)
rosette leaf (PO:0000014)
  • abnormal (PATO:0000460)
    (Rosette leaf::Others)
fruit (PO:0009001)
  • decreased length (PATO:0000574)
    (Silique::Shape::short)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F22436

Determination of introduced cDNA(s)

  • RAFL09-83-C03 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-83-C03 - Resource: pda17861

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-83-C03 - full reading 
    CCGCGCTTCA ATTCTAAATC TCCCGGCGAA GAAAATTACC GGCAAATTTC 
    ACGGAGAAAC CTCGCCAACG AAGCGGAGTT ATGGCGGGCA TGGCTGCGGT 
    GGCAGGATTA CGACCGTGGA ACGCTTTTAT TCAAGCTCTA GTTCTGATAT 
    CTCTATCATT TCCCTTTCTC TCCAGCGCTT ACCGACCTGG AGATATCGTC 
    CGGATGAGCA AGATGGGGCA GTATCACTCT TCGAGAACGA CTTGGCATGA 
    TGTGATCGGA AAGCATTGCC CGATCTTCGC CGTCAATCGC GAGGTGTTGA 
    TCCCAATAGC GAAACCAATT GGCTACACAG GAACTGATCC TTATAAGATA 
    AAATTCCAAG TTGGAAGTGA GAAATTTCTG ATTCACTGGC TTTTGGTAAT 
    TAATCGTAAG AGCTCAGAAG TTCCGATGAT CGATGTAAAT TTGAGATATT 
    CTGGAGGAGA TCTGCTTGGA GTCACAGCTC AAGTTATCGA CATGCCTCAT 
    AGCTATCTGA ATACACACCC GGAGATCCGC AAACAGTTTT GGGATCCTCA 
    ACACTGGCCA AAACATGTTC TTGTTAGATA CACATGGAAG GAGCAGTCAG 
    AGATTGATGT ATCCTCAGGA TTCTATGTCC TGTTTGGCTC AGCTCTCACA 
    TTTTCTTTTG TACTCTCCAT TTACGTCTTA CAATCGTCAC GAGAGAAGCT 
    GGCAAGGTTT GTAAGAGAGA CGGTGGTGGA GAGCAGCAGC ATGAATGTTG 
    GAGAATTTGG CAAGGGGGAT TGAGTCACAT AGTCAAGTAT ATGTATGTTT 
    CTACAATTTT AGATACTTGG AATATGGAAT TGGCCGTTCA ACTCTCAGAA 
    AAGATTTTTC ATCAAACATG AATAGTCGAA AGCAAAAACT TTGTCCTTGT 
    AACATTATGG TTTAATAGAT TTACGTTTCT TAAAAGAAAA A

    Gene models with high sequence identity

    1. AT3G51610.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative str...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G51610.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 53 Blast hits to 53 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR