F22627

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F22627

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1 rosette leaf (PO:0000014)
  • increased length (PATO:0000573)
    (Rosette leaf::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F22627

Determination of introduced cDNA(s)

  • RAFL09-57-L15 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-57-L15 - Resource: pda17772

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-57-L15 - full reading 
    GACGGTTAAT TCATTTCTTA TCTATCACAC AAAGTTGAAT CGTAACCCTA 
    AGCGAATTCA ACAATCGAGA GAGCGAGAGA GATCAATTAA CCCCAGCGAA 
    TCGAATATGC CGAAGAAGAT GGGTCTGAAC AGCAAGGCGG AGGTCGCCAA 
    ATCTCGTAAG AACGCCGCGG AGGCTGAGCA GAAGGATCGT CAGACTCGGG 
    AGAAAGAGGA ACAATACTGG CGCGAGGCGG AAGGTCCCAA ATCCAAAGCG 
    GTGAAGAAGC GAGAAGAGGA AGCGGAGAAG AAGGCAGAGA CCGCCGCTAA 
    GAAATTGGAG GCGAAGCGTC TGGCTGAGCA GGAGGAGAAA GAGTTGGAGA 
    AGGCTTTGAA AAAGCCAGAC AAGAAGGCGA ATCGCGTCAC TGTGCCGGTT 
    CCTAAGGTCA CAGAGGCTGA GCTCATCCGA AGACGCGAGG AAGATCAAGT 
    GGCTCTGGCT AAGAAAGCAG AAGACTCTAA GAAGAAACAG ACTCGCATGG 
    CAGGGGAAGA TGAGTATGAA AAGATGGTTC TGGTGACCAA TACCAATCGC 
    GATGATTCTC TCATCGAGGC ACATACCGTT GACGAGGCTC TTGCACGGAT 
    TACTGTGTCA GATAACCTGC CCGTTGATCG ACACCCGGAG AAGAGGCTCA 
    AGGCTTCTTT TAAGGCATAT GAAGAAGTGG AACTTCCAAG GCTCAAGTCT 
    GAGAAACCAG GTCTAACTCA CACACAGTAC AAGGACTTGA TATGGAAGAT 
    GTGGAAGAAA TCACCAGATA ATCCTCTTAA CCAGGCTGCG GCTGCTGCTG 
    CTAATGAGTG AAATGCAACC TGGAGTCAGA ACAATGGAAG GTGTGATGAA 
    GAAGGAGATG CATGGCAGAG AGCATGATGA AAATCTTTTG TTTCCCAGAA 
    AATATGTTTA GTGAGAGATA CTGTGTAACA TTGCTTATTG TTTCTTGTGC 
    TTTGTGTATA AACACTATGA TATAGCCAGA CAATATCGAT TTAATAAGGA 
    TACCTGTGAG CTGGAATAAT CACAATCACA AAAAAAA

    Gene models with high sequence identity

    1. AT1G16210.1 [+] show detail - unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Protein of unknown function DUF1014 3.7e-43
    HMMPanther Protein of unknown function DUF1014 3.7e-43
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT1G16210.1

    Model type
    Protein coding
    Computational Description
    unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1014 (InterPro:IPR010422); Has 16107 Blast hits to 8386 proteins in 1107 species: Archae - 26; Bacteria - 3370; Metazoa - 4013; Fungi - 1516; Plants - 526; Viruses - 120; Other Eukaryotes - 6536 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR