F22829

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F22829

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F22829

Determination of introduced cDNA(s)

RAFL04-19-O21 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL04-19-O21 - Resource: pda17005

full reading [+] show sequence

GAAGGGTGGT GTCATAAGCG TTTACTGTGA GTCTCTCAAA GAAACCAAAG 
GCAGAGAAAA GAGATAACAC ACACAAAAAA AAATGGCATC AACCTCACTC 
CTCAAGGCTT CTCCGGTGTT GGACAAATCC GAATGGGTCA AGGGACAAAG 
CGTTCTCTTC CGTCAGCCTT CTTCCGCTTC TGTCGTCCTC CGCAACCGTG 
CCACCTCCCT CACCGTCCGT GCCGCTTCCT CCTACGCCGA TGAGCTTGTT 
AAGACAGCGA AAACTATTGC GTCTCCCGGA CGTGGAATCT TGGCGATGGA 
CGAGTCAAAC GCGACTTGCG GGAAACGTTT GGATTCGATA GGGCTAGAGA 
ACACTGAGGC AAATCGTCAA GCTTTCCGGA CTTTGCTGGT CTCTGCACCG 
GGACTCGGAC AGTACGTCTC CGGCGCAATT CTATTTGAGG AGACTCTGTA 
CCAGTCTACC ACCGAAGGCA AGAAAATGGT CGACGTCCTC GTCGAGCAGA 
ACATTGTCCC TGGTATCAAA GTCGACAAGG GTTTGGTGCC ACTTGTTGGA 
TCCAACAATG AGTCATGGTG CCAAGGACTA GATGGTCTAT CATCTCGAAC 
TGCTGCTTAC TATCAACAGG GTGCGCGTTT CGCCAAATGG CGTACTGTCG 
TGAGCATTCC TAACGGTCCG TCTGCCCTCG CCGTCAAAGA AGCTGCTTGG 
GGTCTTGCTC GATACGCTGC CATTTCACAG GACAGCGGTT TGGTTCCGAT 
TGTTGAGCCA GAGATCTTGT TGGATGGAGA ACACGACATT GACAGAACAT 
ACGACGTAGC AGAGAAGGTT TGGGCTGAGG TTTTCTTTTA CCTTGCTCAG 
AACAATGTCA TGTTTGAAGG TATCCTCCTA AAACCGAGCA TGGTGACTCC 
CGGAGCTGAG TCTAAAGACA GAGCTACTCC TGAACAAGTT GCCGCCTACA 
CCCTCAAGCT CCTCCGCAAC AGAGTCCCTC CCGCAGTCCC CGGAATCATG 
TTTTTGTCCG GAGGACAGTC GGAGGTGGAG GCAACACTCA ACTTGAACGC 
AATGAACCAG GCACCAAACC CATGGCACGT GTCCTTCTCC TACGCACGTG 
CGTTGCAGAA CACTTGTCTG AAAACATGGG GCGGCAGACC CGAGAACGTG 
AACGCAGCTC AGACCACTCT CTTGGCCCGT GCCAAGGCCA ATTCGTTGGC 
TCAGCTCGGA AAATACACCG GTGAGGGTGA GTCCGAAGAG GCTAAGGAGG 
GCATGTTCGT CAAAGGGTAC ACCTATTGAA GAGATGATGC TGTGAAAAAA 
GAGATGAAGC AGATGTTTTA ATCACATTTG TTTTTGAGTT TGCTTGTTAT 
TAATCATGTC AAATCATTAT TTTCTCTGCT TACTTTGCGT TAGCTACTCC 
TTTTAATAAG TTCTATTATA TTGAAGTTAT CTAAAAAAAA AA

Gene models with high sequence identity

AT4G38970.1 [+] show detail - fructose-bisphosphate aldolase 2
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Aldolase	8.4e-157
HMMPanther	Fructose-bisphosphate aldolase, class-I	3.8e-268
HMMPfam	Fructose-bisphosphate aldolase, class-I	2.1e-167
PatternScan	Fructose-bisphosphate aldolase, class-I	0
Gene3D	Aldolase-type TIM barrel	2.3e-142

See the detailed result >

AT4G38970.1

Model type: Protein coding
Short Description: fructose-bisphosphate aldolase 2
Curator Summary: Protein is tyrosine-phosphorylated and its phosphorylation state is modulated in response to ABA in Arabidopsis thaliana seeds.
Computational Description: fructose-bisphosphate aldolase 2 (FBA2); FUNCTIONS IN: fructose-bisphosphate aldolase activity, catalytic activity; INVOLVED IN: response to cadmium ion, pentose-phosphate shunt, response to abscisic acid stimulus; LOCATED IN: in 7 components; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aldolase-type TIM barrel (InterPro:IPR013785), Fructose-bisphosphate aldolase, class-I (InterPro:IPR000741); BEST Arabidopsis thaliana protein match is: fructose-bisphosphate aldolase 1 (TAIR:AT2G21330.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR