F22949

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	cauline leaf (PO:0000013)	increased size (PATO:0000586) (Cauline leaf::Shape::large) dark green (PATO:0001249) (Cauline leaf::Color::dark)
	rosette leaf (PO:0000014)	increased size (PATO:0000586) (Rosette leaf::Shape::large) increased length (PATO:0000573) (Rosette leaf::Shape::long)
	stem (PO:0009047)	increased thickness (PATO:0000591) (Stem::Shape::thick) abnormal (PATO:0000460) (Stem::Others)
	stem internode (PO:0020142)	decreased length (PATO:0000574) (Stem::Shape::short internode)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F22949

Determination of introduced cDNA(s)

RAFL06-86-A08 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-86-A08 - Resource: pda03884

full reading [+] show sequence

AGAAGAAATC TTTCAGATTT GCGCATATCG ACAATTTTCC GAGCGGCCAG 
TTTACGTATT TTGTTTGTAG TTAACGTGTT TCAAGGACTT TGACAATGGC 
TGAGGAAGCG CATAAGGTAA CATTGAATGT CTATGATTTA AGCCAAGGCT 
TGGCACGCCA GCTCTCACAA TCACTCCTGG GAAAGGTTAT TGAAGGTGTA 
TGGCATACAG GAATAGTTGT CTATGGGAAT GAGTACTTTT TTGGAGGAGG 
GATACAACAT TTACCAGTTG GAAGAACTCC ATATGGAACA CCAATTCGAA 
CGATAGAGTT GGGTCTATCA CATGTGCCTA AAGATGTATT CGAGATGTAC 
TTGGAAGAAA TCAGTCCTCG TTACACTGCT GAATCCTACA ATTTACTTAC 
TCACAACTGC AACAACTTCA GCAACGAGGT CGCTCAGTTT TTGGTGGGTA 
AAGGGATTCC TGACTACATT CTCCAGCTTC CTAATGATGT TCTAAACAGT 
CCCATGGGTG GTCTTATAAT GCCTATGTTG CAAGGCCTCG AAACAACTCT 
AAAGGCTGGT GCTGTTCCTC AAGTTCCACA GTTTAGGCCA CAGCCACAAC 
CTTTTGGAGC TTTTAGTAAA GATGATGGCC CACAAATTGT GATAGCTCCT 
AAGCTCGAGG CAGCAGAAAC CTCAACTGCA ACTGAGAAAG TGCCACCTGT 
TATTCAACCA TCAGCTAGTA AAGAGAAGGT CAAGGACGAC CCGTTGGGTG 
ATGCTAGGGC CAAGATTCAG GAAGAGATTA CAAGCGAATT TGCAGCTCTA 
ATGGCACAAG GCACATTACG AGCAAGTGAA GCAGCTGCTA TGGCGACAAA 
AAGAGTCATG CAAAAGTACG GACATCTCAA TGTAAACGCT TAGTGCAATA 
ACAGAGAGAT GAAACATTTT ATTAAAAAAA AAAAAAAAA

Gene models with high sequence identity

AT3G07090.1 [+] show detail - PPPDE putative thiol peptidase family protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPanther	UNCHARACTERIZED	2e-53
HMMPfam	Protein of unknown function DUF862, eukaryotic	3.1e-42

See the detailed result >

AT3G07090.1

Model type: Protein coding
Short Description: PPPDE putative thiol peptidase family protein
Computational Description: PPPDE putative thiol peptidase family protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF862, eukaryotic (InterPro:IPR008580); BEST Arabidopsis thaliana protein match is: PPPDE putative thiol peptidase family protein (TAIR:AT5G25170.1); Has 872 Blast hits to 872 proteins in 189 species: Archae - 0; Bacteria - 0; Metazoa - 235; Fungi - 119; Plants - 332; Viruses - 0; Other Eukaryotes - 186 (source: NCBI BLink).
Link: InterPro Scan - TAIR