F23029

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F23029

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F23029

Determination of introduced cDNA(s)

  • RAFL09-50-G20 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-50-G20 - Resource: pda06449

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-50-G20 - full reading 
    GAGACAAATC TAGTGATGGG TTGCGACTCA CATGGAAATC TAAGCGACAC 
    AGAGTTCAGC AAGCCGTTGC CATCCATAGG TGTATATGTC GCTGCAGCTT 
    CACTGATCTG TGGAGTTGCT ATGTTTTCCG ATCTTCTTCA CGGCTTCCGG 
    CACCGTAAGT TCTGGTTTCC TTGCAAATTC TTCTCTCTCA ACGCTACCAC 
    TCTCACCTTT ATCTCTGTAT GCGTCAAACT CTCATTGGAT CTCAACACTT 
    CTATGCCTAG TCGCCAAGAT CAGCTTGCTA AACTCAGCAG CAGCGTCTTC 
    GTATGCACCG TGATGGCTAA TTCCATGCCT TCTCTTGGTT ACATGGTCAC 
    GCAAGATCTC CTCATGAACC TCACGGCTCT TGGGATTCTA GTCATCACCG 
    ATGTTGTTAA CATCTGTATC CAATTGGGTA CAGGAGCTAT ATATGTGTTC 
    CCTCAAGAAC ACGCTCTGGT CATTATTCTC ATGCTTTTGA TGTTTATGAT 
    CTTGAGTTTC TCTGCTATCA CTGTCCCAGC CACAAAGCGT TTCTTGGAGC 
    TCAAGTACAA GAAGAGATAC GAGTTTGCTT TGAAGCAGTG TCCTTCGTAT 
    ACAGAGAGAA GAAGAGGGGT TCCTAAGCTT AAAGAAGATC TGATGAAATT 
    CTGGATGATG GCTCACACTT CTAGCCCTCA GTTTGTGATG GCTCGCTCTG 
    TTACTTGCAC CACCACTGGT TTCCTCTGTT TCTTGATTGC AATCACATTG 
    GCTGAAGCCA TGGTCCGGTC TTACTTTCTT CAACCCCGGT CACTGGGGTT 
    CTGCAATGGA GATTCTGATT ACAAATGGTC AACCACTTTG GTTCTAGTCT 
    CCCAGACAGC TGCAGTGGCC ATAGGAACCG TTGCTCCAGC GAGCAGATGG 
    CTCAAGGCAG TGAACTTTAG GTGTCCATTT AGAAACAAGA AATCTTTGAA 
    AGATGAGTTA AGAGTAGAGA GTTATTGGGT AGAGTGTCTC GCTGAGAAGA 
    AAGAACGTCC CTTGAACTTT TGGATGCTCC ATGGTCGCTG CAGCAGGAAG 
    CTTGCACACG ACTTAAACCG GTTGATGCTT GATATCTGCA TTGCAACACA 
    GTATGGTATA GTGCTGGCTA GCAAGTTTCT CCGTTTCATC ACGGTCTATT 
    GTTCGAGTAG AATCTTGCTA TGTTGTTTTC ATTTCACCTT CAAAAGTGAT 
    TCTGTTGCAA ACGCTGAGTC CTCCGGTTCA AATCCATCAA CCAGACAATT 
    CGTTCTGCAT CTTGAAGGAG AGGAGGAGAT GGTGGACTAC ATGGCACGTA 
    GCAACCGTGT GGCCACAGAC CACTTGATAC AAAAGGGTCG GAAGAAACAA 
    CCTGTAAACT TGATAGAGCT CTTGGAGGCA ACAACTTTCA TCTCAAAAGG 
    ATTTGAAGGG ATTCGAGATT TTGACAGCGA CGAGGTTTCT TCTCTGGCCT 
    CTGGAGAGCC ACCTAATAGT TGGGCCCTTC CATTGGTAAC ACTGACGAGT 
    ATCGCTGTCG CTCTTCCTAA CATCAAGCCT TGCTCGCTCA AGAAGTTAGT 
    GAAAGCTGTA AACGAGGCAT TGGTCTATGT CAACAAGTTC GAAGAGGTCT 
    TAGACATCGA AGGAGAGTTA GCTAACAGCA GGAAAGCTGC AGAAGTTGTT 
    TGGTTAGGAG TTGATCTCTA CCATAAATGG CTCAACGTGG ATCTTCGAAA 
    ACTATCCAAG CAACATAGCA AAACACCACA GGAAGTTCTT AAAGAGCTGG 
    TAGATATAGC ACAAAAAGAG TTTACAGAGT CATGGGAGAA AAATCGGATA 
    CTATGCATGA AGCATAAGCC CTCGCACTGG CCCATCAAGA CTCAAGCAGC 
    AAACTCAATG TACCGAATCA GCCAAACCCT TTTGATGAAG TACGAATCAA 
    GAAACATTGA AACAGAGGAG ACTCTGTTGA AAGATGTGGA AAAGATGGTA 
    TCGGACATAG TATCAGGATG CTTTTGCAAC ACGGCACAAG TTATTGGAAT 
    GAAGTGTTTG GTTACAGCAG TGGAAGTGAG GGAAGCGTCG GTGAGAGAAG 
    CGGCAATGCA TTTGGGGAGA ACAGAGAAGA TACTTGAGAT CGTAGACAGG 
    AGATGCATGC CTGCTTTGTC TCATCACAAA GTGGCAAAGA TTGATGAATG 
    GAGAGAGTTT TATAGGACCA ATAAATCCAT CACTTTCACT CATCCTTCGT 
    CCCAGTGTAC GACCCGTGAA CTCATTATCA ACCTAGAATA ACACATTTTC 
    TTGTCACATT TAAAGAATTA ATTACGTTTT GTACATGATA AAACCTAATT 
    AGCAAATAAA ATCCTTTCTT TGTCGGTTG

    Gene models with high sequence identity

    1. AT4G17250.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1); ...
      E-value: 0; Score: 99.96

     

    InterPro Scan Digest

    See the detailed result >

    AT4G17250.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1); Has 31 Blast hits to 31 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR