F23122

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F23122

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
cauline leaf (PO:0000013)
  • increased size (PATO:0000586)
    (Cauline leaf::Shape::large)
rosette leaf (PO:0000014)
  • increased size (PATO:0000586)
    (Rosette leaf::Shape::large)
  • increased length (PATO:0000573)
    (Rosette leaf::Shape::long)
sporophyte vegetative stage (PO:0007134)
  • decreased speed (PATO:0000304)
    (Adult plant::Growth::slow)
stem (PO:0009047)
  • present in fewer numbers in organism (PATO:0001997)
    (Stem::Number::few)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F23122

Determination of introduced cDNA(s)

  • RAFL09-20-B22 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-20-B22 - Resource: pda05558

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-20-B22 - full reading 
    ACCACACTGT CTCCATCTTT CTTTCCTCTT CTTCAACATC TCTCTTCTCC 
    CAAGAAAATA AAACACAATT TCCCAGATTC AAAACTTCTT TTTCACAAAT 
    CACAACGTCT TCAAAGGGAT CAAGAATCTT ATTACTCTTC TCTTCTTTTG 
    CTTTTAAGAA GAAGTAAAAA CATCATCTTA ACTTTCACTT TTTGTATTAT 
    CTTTCTCTTT CACTCACTTT AAAGTCTATT TAGAGATTCA AAAACAAAAT 
    CTTCCAGAAA CTGCTTCTGA TCTTAGAAGA TGACTCACTT CTCCTAAAAA 
    GCACCAATTT CAATCCTATT TTTTTCTCTT GTTTTCCGGC AAGATTTGGT 
    AAAATTTTGT GTTCTGATTT GTTGTTTTGA ATATCAACTA TGGAACAACG 
    GAAGAAAGGT TGTAAGATCA GGAAGAGAGG TGGTTCTTCC TCTTCTTCTT 
    CTTCACTTGC TCGTCGAAAC CGCTTCAAAC GTGCAATTTT CGCCGGGAAA 
    AGAGCCGCTC AAGACGACGG TGGCTCAGGA ACTCCTGTTA AGTCCATCAC 
    CGCCGCTAAA ACTCCAGTTC TGTTATCGTT TTCGCCGGAA AATCTTCCTA 
    TAGATCATCA TCAATTGCAG AAAAGCTGCG TGTCGGCGAG AAAGCTAGCT 
    GCGACGCTGT GGGAAATCAA CGACGACGCA GACCCTCCGG TAAATTCTGA 
    TAAAGATTGC TTGAGAAGCA AGAAACCATC GAGATACAGA GCGAAGAAAT 
    CAACAGAGTT CTCTTCCATT GATTTCCCGC CACGATCATC CGATCCGATT 
    TCTCGTCTAA GCTCAGAGAG AATCGATCTC TGTGACGATA TGATTCGTAG 
    AAGATCAACA AATCCTCAGA AATTAAACCC AATTGAATAC AAAATCATTG 
    GCGCAAACTC GGTGAAAACT CGTTTCAAGA ATGTCAGTGA CGGATTAACA 
    ACGTCTAAAG AACTGGTAAA GGTATTAAAA AGGATCGGTG AGCTCGGAGA 
    TGATCACAAG ACAGCAAGCA ATCGTTTGAT CTCTGCTTTG TTATGTGAAC 
    TAGACAGAGC AAGATCTTCA CTAAAGCATC TAATGAGTGA ATTAGATGAA 
    GAGGAAGAGG AGAAGCGGAG GTTGATAGAG AGTCTACAAG AAGAGGCGAT 
    GGTTGAGAGA AAACTCCGGC GAAGAACAGA GAAGATGAAT AGAAGATTAG 
    GGAGAGAGCT CACGGAGGCT AAAGAAACAG AGAGGAAGAT GAAGGAGGAG 
    ATGAAAAGAG AGAAGAGAGC TAAAGATGTT CTTGAAGAGG TTTGTGATGA 
    GCTAACTAAA GGAATCGGAG ATGATAAGAA GGAGATGGAG AAAGAGAGAG 
    AGATGATGCA TATAGCTGAT GTTTTGAGGG AAGAGAGAGT TCAAATGAAG 
    CTTACGGAGG CGAAGTTTGA GTTCGAAGAT AAATACGCCG CCGTGGAGCG 
    GCTGAAGAAG GAGCTCCGGC GGGTTTTGGA TGGTGAAGAA GGAAAAGGGT 
    CGTCGGAGAT TCGTAGGATT TTGGAGGTGA TTGATGGTTC TGGTTCTGAT 
    GATGATGAGG AGAGTGATCT TAAGTCCATT GAGTTGAACA TGGAGAGTGG 
    TAGTAAATGG GGTTATGTTG ATAGCCTGAA AGATCGTCGG AGATTTGATG 
    GCTCCGGCGG CGATGATGAT GATGATGATC CGGTGGAGAA GAGATCAGTG 
    ATTGTTGAGA ATGGTGAGAG AGATGAGTCT TTGAAGACTT TGAGAGATTA 
    CATTGTTTCA AATGTTAGAT GTATTGGTCC TTCATCGTCA GAGCAGTGGA 
    ATCATCGGAA TTTACCAAGC TCTGAGTTTG TGTAATCACC ACCGCTAGCG 
    CCGGCGAGGA AGAAAAAGAA ATCATTTTTT TTTATAGTAT ATAATATTTC 
    AGTATTTGTA ATTTATTCAA TTTAATTTGA AATACAAAAT CAATTACG

    Gene models with high sequence identity

    1. AT5G22310.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11590.1); ...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT5G22310.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR