F23250

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F23250

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F23250

Determination of introduced cDNA(s)

RAFL09-43-L08 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-43-L08 - Resource: pda08380

full reading [+] show sequence

AAAAAGAAAA ACATTCGACA TTACAGAAAA GAAAAAACTA TAAGAAAATC 
TTAATTAATA AAATAATATA TTCAGGAGGG CGAGAGAGAG AGAGAGGGAT 
GATGAAGGAA GAACAATGGG CACCAGTGAT AGTAATGTTA ATATCAAGTG 
TTGCAATGGG ATCAGTGAAC GCTCTCGTTA AGAAAGCACT TGATGTTGGT 
GTTAACCATA TGATCTTTGG TGCTTATAGA ATGGCTATTT CTGCTCTAAT 
CTTGGTTCCG TTTTCTTATA TTTGGGAGAG GAAAACAAGG CCACAACTAA 
CGTTCATGCT TTTGTGCGAA CATTTCATCA GCGGATTACT TGGGGCAAGT 
TTGATGCAAT TTTTCTTTTT ACTTGGGCTT TCGTACACGT CAGCAACTGT 
TTCGATGGCT CTAGTTAGCA TGTTACCTGC TATCACCTTT GCGTTAGCCC 
TTATTTTCCG GATAGAGAAT GCGCAAAACC TAAAGAGCAA AGCAGGCGTG 
CTCAAAGTAA TGGGAACCCT AATTTGCATA ATGGGAGCAA TGTTGTTGAC 
ATTTTACAAA GGCCCAGAGT TATCAAACCC TCATTCTCAT CCACAAGCTC 
GTCACAACAA CAACAATAAC AATGGTCACG ACCAAACAAA GAAATGGCTT 
CTAGGCTGTC TTTATTTAGT CATTGGGACA GTGTTGTTGT CTCTATGGAT 
GTTGTTTCAA GGGAAATTAA GCTTTAAGTA TCCTGGAAAT AAATACTCAA 
GCACTTGTCT CATGTCAGTC TTCGCATCAT TTCAATGTGC TATTTTGAGT 
CTTTATAAAA GTAGAGACGT CAAAGATTGG ATCATTGAAG ATAAATTCGT 
CATTTTGGTC ACCCTTTACG CTGGAATAGT GGGACAAGCG ATGTCGACAG 
TGGTAACGTC ATGGTCCATA AAAATGACAG GAGCAGTTTT CGTCTCAACA 
TTCAGCCCCG TCAGCCTCGT CGCCGCTACG TTATTCGATT TCCTCATCTT 
ACACTCTCCT TTATACCTTG GCAGCATACT TGGATCAGTA GTGACTATAA 
CTGGCCTCTA CGTTTTTCTT TGGGGAAGGA AGAATGAGAC AGATCAGTCT 
GTTTCGAAGA CTTTGAACAG TTCCCAGTTT TCTCAGAATA AGGATAACGA 
AGACCATACA ATAGCAAATC ATAAGGATAC TAATTTGCCC GTTTGATATA 
TATATATATC ATATTTATAG AGGTAGCTAG ATATTTGCTA TCATAATCGT 
GATAGTACTG TCATTGATCA GCTCTATATT ATAAGACTTA TGTTCTTCTG 
TATTGCCAAC TATAGCTCAC TGTATGTTTG TAACCAGTTG GATTGGTTTA 
ATTGGAAATA AAAGTAGTTG GAGATGTA

Gene models with high sequence identity

AT4G01430.1 [+] show detail - nodulin MtN21 /EamA-like transporter family protein
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
HMMPfam	Protein of unknown function DUF6, transmembrane	6.1e-09
HMMPfam	Protein of unknown function DUF6, transmembrane	2.6e-07
superfamily	Multidrug resistance efflux transporter EmrE	1.3e-10
superfamily	Multidrug resistance efflux transporter EmrE	2.4e-07

See the detailed result >

AT4G01430.1

Model type: Protein coding
Short Description: nodulin MtN21 /EamA-like transporter family protein
Computational Description: nodulin MtN21 /EamA-like transporter family protein; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF6, transmembrane (InterPro:IPR000620); BEST Arabidopsis thaliana protein match is: nodulin MtN21 /EamA-like transporter family protein (TAIR:AT1G01070.1); Has 2489 Blast hits to 2481 proteins in 402 species: Archae - 14; Bacteria - 1085; Metazoa - 6; Fungi - 8; Plants - 1212; Viruses - 0; Other Eukaryotes - 164 (source: NCBI BLink).
Link: InterPro Scan - TAIR