F23317

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F23317

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F23317

Determination of introduced cDNA(s)

  • RAFL06-86-K05 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-86-K05 - Resource: pda03895

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-86-K05 - full reading 
    AAGGAAGAGA AGAGTGTCCA TATCATAGAT TAAAAATCAT TCGTTAATCA 
    AACCACAAAA TCTAACTTCC ACACACAAAA CACACATACA CAAGAAAATA 
    AAAATAAAAA TGGAATTAGT TGAAGAGACC ATTCCAAAAG AAGGGAAAAA 
    GATGGGAGAA AGAATTGTGG TCGACAAAGC TTATCTTTAC CAAGAAGACA 
    AACCACTCAC CGTCTGCAAG ACTTCTCTCT TCTACACCGG CGATGGCTTC 
    GCCGCCTATG ACTGCCGTGG TGATATCATC TTCAGGGTTG ATTCTTATGG 
    ACCTGACACA AGAGATAACG ATGAGATTGT CCTCATGGAC GCGACCGGGA 
    AGTGTCTCCT TACCGTTAAA CGAAAGAGAC CAACTCTACA CCAAAGATGG 
    GAAGGTTTTC TCGGCGAGAG ATCGGAAGGT CAGAAACCGA TATTCAGCGT 
    CCGTAGATCG TCGATAATCG GACGGTGTAC GATGGAAGTA GAAGTTTACG 
    ACGGAACAGG AGAAGAGTAC ATTATCGATG GAGACTTCTC GCAACGAAGC 
    TGTCTCATAT ACGACACGAA GAAATGTACT GTGGCTGAGA TCAAACGCAA 
    AGTAGACGCG TCAACGAACG TGATGCTTGG TCGAGATGTG TTCACTCTAG 
    AGATTAAACC GGGTTTTGAT GGCGCTTTCG CGATGGGTTT GGTCGTTGTG 
    CTTGACCAGA TCAACGGTGA TGATCCAGTT GAGATTGGTG ATGAACAGGT 
    ACACCCTTTT GTAGAGGATT AGTGTCGGTC TCTCTCTCAC CTCTCTCAGC 
    GGTCTTCACG TTAACATATC GAATCTAATC TTTAGTTTTT CAATCTTTGG 
    ATTTGGACCA TATGGGATTA TGGAGATCTG TTTGTATCAT TCTGTGTTAA 
    GTCATTTAAG TTGCTACGTT AGAAAAAAAA AAAAAAAA

    Gene models with high sequence identity

    1. AT3G15810.1 [+] show detail - Protein of unknown function (DUF567)
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G15810.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF567)
    Computational Description
    Protein of unknown function (DUF567); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF567 (InterPro:IPR007612); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF567) (TAIR:AT1G80120.1); Has 436 Blast hits to 435 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 7; Plants - 429; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR