F23419

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F23419

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T1  
whole plant (PO:0000003)
  • decreased height (PATO:0000569)
    (Adult plant::Plant height::short)
rosette leaf (PO:0000014)
  • dark green (PATO:0001249)
    (Rosette leaf::Color::dark)
  • decreased size (PATO:0000587)
    (Rosette leaf::Shape::small)
sporophyte vegetative stage (PO:0007134)
  • decreased speed (PATO:0000304)
    (Adult plant::Growth::slow)
stem (PO:0009047)
  • present in fewer numbers in organism (PATO:0001997)
    (Stem::Number::few)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F23419

Determination of introduced cDNA(s)

  • RAFL09-40-P17 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-40-P17 - Resource: pda06245

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-40-P17 - full reading
    ATTCTCTGTT TCGTGTTCCA CTTCACGATT GAGAGAACAC TTTCCTAAGT 
    TTATCAAGAA CATTTCTTTT CAATTTCTCG ATTCTTTCTG GCTCATTCTC
    TCATCTCTGT TTCATATCTA AATTATTGAT TGAGAATTCG ACTTGTGGAA
    ATGGCAACAG TTGCATCAAA TCTCGCTTGT ATCGGAAAAG TAACGATGTC
    TAGAGCTAGT TCAATGGTAG GATGGAGGTT GCAGATAAAT TGCAGAAAGA
    AAGAGAAAGG AAGAGATCAG AGTCATTATC CTTACAAAGT CATTGAAATC
    ACTCCTCCTC CTAAATCTCT CGGCATTCGT TGCCTTCCTC ATAACCTTCA
    ATGTGGAGAG AACGTGATGA TCGAAGGGCA AACGTACACA ATCTCTGCTG
    TGACTCACCG GTATCAGCTC CGGAAAGGCA AATACGAGCC GAGTGAGAGG
    CGGCTCGATG TTCTCTCTGC TGCTAGATAC GTTTTAAACC TTTACTTCGA
    CAATTTGCTC CAAAACTCCT GACAACTTTT ATTTAGCTAA AAAGTTTGGT
    CTAGAGGATT TTCATTGTAT CCATGAATGC TTGTGAATTT GTTAAGCAAT
    GATTTGTACT TCTCTCAAAA AAAAAAAAAA AA

    Gene models with high sequence identity

    1. AT5G40500.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G40500.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR