F23638

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F23638

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F23638

Determination of introduced cDNA(s)

  • RAFL09-50-G20 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-50-G20 - Resource: pda06449

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-50-G20 - full reading
    GAGACAAATC TAGTGATGGG TTGCGACTCA CATGGAAATC TAAGCGACAC 
    AGAGTTCAGC AAGCCGTTGC CATCCATAGG TGTATATGTC GCTGCAGCTT
    CACTGATCTG TGGAGTTGCT ATGTTTTCCG ATCTTCTTCA CGGCTTCCGG
    CACCGTAAGT TCTGGTTTCC TTGCAAATTC TTCTCTCTCA ACGCTACCAC
    TCTCACCTTT ATCTCTGTAT GCGTCAAACT CTCATTGGAT CTCAACACTT
    CTATGCCTAG TCGCCAAGAT CAGCTTGCTA AACTCAGCAG CAGCGTCTTC
    GTATGCACCG TGATGGCTAA TTCCATGCCT TCTCTTGGTT ACATGGTCAC
    GCAAGATCTC CTCATGAACC TCACGGCTCT TGGGATTCTA GTCATCACCG
    ATGTTGTTAA CATCTGTATC CAATTGGGTA CAGGAGCTAT ATATGTGTTC
    CCTCAAGAAC ACGCTCTGGT CATTATTCTC ATGCTTTTGA TGTTTATGAT
    CTTGAGTTTC TCTGCTATCA CTGTCCCAGC CACAAAGCGT TTCTTGGAGC
    TCAAGTACAA GAAGAGATAC GAGTTTGCTT TGAAGCAGTG TCCTTCGTAT
    ACAGAGAGAA GAAGAGGGGT TCCTAAGCTT AAAGAAGATC TGATGAAATT
    CTGGATGATG GCTCACACTT CTAGCCCTCA GTTTGTGATG GCTCGCTCTG
    TTACTTGCAC CACCACTGGT TTCCTCTGTT TCTTGATTGC AATCACATTG
    GCTGAAGCCA TGGTCCGGTC TTACTTTCTT CAACCCCGGT CACTGGGGTT
    CTGCAATGGA GATTCTGATT ACAAATGGTC AACCACTTTG GTTCTAGTCT
    CCCAGACAGC TGCAGTGGCC ATAGGAACCG TTGCTCCAGC GAGCAGATGG
    CTCAAGGCAG TGAACTTTAG GTGTCCATTT AGAAACAAGA AATCTTTGAA
    AGATGAGTTA AGAGTAGAGA GTTATTGGGT AGAGTGTCTC GCTGAGAAGA
    AAGAACGTCC CTTGAACTTT TGGATGCTCC ATGGTCGCTG CAGCAGGAAG
    CTTGCACACG ACTTAAACCG GTTGATGCTT GATATCTGCA TTGCAACACA
    GTATGGTATA GTGCTGGCTA GCAAGTTTCT CCGTTTCATC ACGGTCTATT
    GTTCGAGTAG AATCTTGCTA TGTTGTTTTC ATTTCACCTT CAAAAGTGAT
    TCTGTTGCAA ACGCTGAGTC CTCCGGTTCA AATCCATCAA CCAGACAATT
    CGTTCTGCAT CTTGAAGGAG AGGAGGAGAT GGTGGACTAC ATGGCACGTA
    GCAACCGTGT GGCCACAGAC CACTTGATAC AAAAGGGTCG GAAGAAACAA
    CCTGTAAACT TGATAGAGCT CTTGGAGGCA ACAACTTTCA TCTCAAAAGG
    ATTTGAAGGG ATTCGAGATT TTGACAGCGA CGAGGTTTCT TCTCTGGCCT
    CTGGAGAGCC ACCTAATAGT TGGGCCCTTC CATTGGTAAC ACTGACGAGT
    ATCGCTGTCG CTCTTCCTAA CATCAAGCCT TGCTCGCTCA AGAAGTTAGT
    GAAAGCTGTA AACGAGGCAT TGGTCTATGT CAACAAGTTC GAAGAGGTCT
    TAGACATCGA AGGAGAGTTA GCTAACAGCA GGAAAGCTGC AGAAGTTGTT
    TGGTTAGGAG TTGATCTCTA CCATAAATGG CTCAACGTGG ATCTTCGAAA
    ACTATCCAAG CAACATAGCA AAACACCACA GGAAGTTCTT AAAGAGCTGG
    TAGATATAGC ACAAAAAGAG TTTACAGAGT CATGGGAGAA AAATCGGATA
    CTATGCATGA AGCATAAGCC CTCGCACTGG CCCATCAAGA CTCAAGCAGC
    AAACTCAATG TACCGAATCA GCCAAACCCT TTTGATGAAG TACGAATCAA
    GAAACATTGA AACAGAGGAG ACTCTGTTGA AAGATGTGGA AAAGATGGTA
    TCGGACATAG TATCAGGATG CTTTTGCAAC ACGGCACAAG TTATTGGAAT
    GAAGTGTTTG GTTACAGCAG TGGAAGTGAG GGAAGCGTCG GTGAGAGAAG
    CGGCAATGCA TTTGGGGAGA ACAGAGAAGA TACTTGAGAT CGTAGACAGG
    AGATGCATGC CTGCTTTGTC TCATCACAAA GTGGCAAAGA TTGATGAATG
    GAGAGAGTTT TATAGGACCA ATAAATCCAT CACTTTCACT CATCCTTCGT
    CCCAGTGTAC GACCCGTGAA CTCATTATCA ACCTAGAATA ACACATTTTC
    TTGTCACATT TAAAGAATTA ATTACGTTTT GTACATGATA AAACCTAATT
    AGCAAATAAA ATCCTTTCTT TGTCGGTTG

    Gene models with high sequence identity

    1. AT4G17250.1 [+] show detail - unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1); ...
      E-value: 0; Score: 99.96

     

    InterPro Scan Digest

    See the detailed result >

    AT4G17250.1

    Model type
    Protein coding
    Computational Description
    unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G47580.1); Has 31 Blast hits to 31 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR