F24151

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) abnormal (PATO:0000460) (Rosette leaf::Others) abnormal (PATO:0000460) (Rosette leaf::Others)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin) abnormal (PATO:0000460) (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F24151

Determination of introduced cDNA(s)

RAFL09-19-K07 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-19-K07 - Resource: pda05521

full reading [+] show sequence

AAGTAAAGAA ACAAACAAAC AAACAAAAAA CACACTTCAC TCGCTACACA 
AGGAAGAGAG ATGGCGACGT CAGGAACATA TGTGACGGAG GTTCCATTGA 
AAGGATCGGC TGAGAAACAC TACAAGCGGT GGAGGAGTGA GAACCACCTC 
TTCCCCGACG CCATCGGCCA CCACATCCAA GGTGTCACCA TCCACGACGG 
TGAATGGGAC TCCCATGGAG CCATCAAGAT TTGGAACTAC ACATGCGATG 
GGAAACCGGA GGTGTTCAAG GAGAGGAGAG AGATAGACGA TGAGAATATG 
GCGGTAACGT TCAGAGGACT CGAAGGTCAC GTGATGGAGC AGCTTAAAGT 
GTATGACGTC ATCTTTCAGT TCATTCAAAA GTCACCTGAT GATATCATCT 
GTAAGATCAC TATGATCTGG GAGAAGCAAA ACGATGACAT GCCTGAGCCC 
AGCAACTACA TGAAGTTCGT CAAGAGCCTC GCTGCTGACA TGGATGATCA 
CGTTCTCAAA GCCTAAATAT CCCTTTCACA TCAACCCATC ATCACCTAAT 
ATCATGATCA TCATCACCCT CATACGTACA TTGCTCCTTT TGTGTGTGTG 
TGTGTGTATC GTTTTTATGG TGTTTTCAAT ATAATAAATG GGGGTTTACA 
TGTATGGTTT CATCTACTAT AATATGCTTT GATGTTGTTT ATTATGGTTG 
AGGTTTCATG TATGCTCATC TACGCATGTA TCCTTGTTAA TTAATGATTT 
TCAAGAGTTA TCAAAC

Gene models with high sequence identity

AT2G01520.1 [+] show detail - MLP-like protein 328
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
superfamily	Bet v1-like	1.1e-36
Gene3D	no description	3.1e-18
HMMPfam	Bet v I allergen	7e-62

See the detailed result >

AT2G01520.1

Model type: Protein coding
Short Description: MLP-like protein 328
Computational Description: MLP-like protein 328 (MLP328); FUNCTIONS IN: copper ion binding; INVOLVED IN: response to zinc ion; LOCATED IN: cellular_component unknown; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Bet v I allergen (InterPro:IPR000916); BEST Arabidopsis thaliana protein match is: Polyketide cyclase/dehydrase and lipid transport superfamily protein (TAIR:AT4G14060.1); Has 369 Blast hits to 340 proteins in 40 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 369; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR