F24803

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F24803

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F24803

Determination of introduced cDNA(s)

  • RAFL02-10-I13 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL02-10-I13 - Resource: pda00046

    full reading [+] show sequence

    Nucleotide sequence: RAFL02-10-I13 - full reading 
    AAACCCTTAA GCTAAGCAAA TTTCAAAGCA TTTCAAAAAC CCTAGCCTAT 
    CTCTCTTTAT CTCTCACAAC AAAATCTTTG AAATGGCGAT CTCTAAGGCT 
    TCCATTGTTG TTCTCATGAT GGTGATTATC TCCGTCGTTG CATCGGCACA 
    ATCTGAGGCA CCAGCACCAA GTCCTACTTC TGGATCTAGT GCGATCTCAG 
    CGTCTTTCGT GTCAGCTGGA GTTGCAGCAG TCGCGGCTCT TGTTTTTGGC 
    TCAGCTCTTC GGATCTAAGT TACTGTGATG GTGATTTCGT ACAGAGATTG 
    TTTTTGCGGT ATAGGCCATT CATCATTATT CGTCGTCTCG TGTGTATTCC 
    GAAGCAGCTT ATAGATCTCA TTTTCTATTT GTCCCTCTTC TTCTTCGTTT 
    TCTATCTTAA TCTTCATATC TGTATGAGGA TATTACTATT TCTTTTTAGA 
    GTATTTGTGG TTTTGTGATT TTCTAGACGA TTTCTTAGTT ATGCGATATG 
    GTTTTTGATA TGATATGAAT CTTATTCTAT TT

    Gene models with high sequence identity

    1. AT5G11740.1 [+] show detail - arabinogalactan protein 15
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G11740.1

    Model type
    Protein coding
    Short Description
    arabinogalactan protein 15
    Curator Summary
    Encodes arabinogalactan protein (AGP15).
    Computational Description
    arabinogalactan protein 15 (AGP15); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR