F24817

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F24817

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage
Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F24817

Determination of introduced cDNA(s)

  • RAFL09-84-A11 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-84-A11 - Resource: pda08912

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-84-A11 - full reading
    ATATATCACA GCCATGGTGG TTGTCACTCA CATCTCCACT TCCTTCCACC 
    AAATCTCTCC TTCCTTCTTC CATCTCCGTC TTCGTAATCC CTCCACCACT
    TCTTCGTCTC GTCCCAAACT CGACGGTGGT TTCGCTTTGT CAATTCGAGC
    TTACATAGAG AAACCAAACT CTTTCTCCAC CTTCGCTAAC AAAGTCATCG
    GTTCTCTTCC CGTTATCGGA CTCCTCGCTC GAATTATCAG CGATGAAGGC
    GGCGTTGGTA GAGATCTCGT CGATTTCGCT GAGTTTAGGA AACGAGTTGG
    GAATAAATGT ACTCCTGATG ATTCTAGGGC TTTCTATGAG TTCCAACAGC
    GACGAGGCAA GGCAGGTGAG CCTTTGTATG TGCTTCTGTG TTGTTGGGTT
    GCTGCAGTAG GTGCAGGTCT TCTCAAATCT GAAGAGATTC TTGAAGGTGT
    TACTAGAGTT AGCATTTCCA ATGATCTCGA GTTTGAAGAA CAGAACTTCA
    TTGCTTTGAT GACTGAAGCT AGACAGAGAA GAGCAAAGTT GAACATTGAT
    GCGCCAACAA TACCGATGGA ACTAAGAGTT GAAAAGGCTC TTGAAGGTAT
    TTATGCTTGT TGCTTTCGGA GAGGACTTAT TGAAGAGGAG GATGAGAAGC
    TTCTTAAAGT GATGTTAATA GCGGTTTTCC CATCGGTTGA GAAGTCTGAG
    ATAGAGAGAA TCATCAAAGA GAAGGCGACA AGGGTTGAGG AAGGAGGAGA
    GGAAGAGAAT GTTATGGCGA AACGGTTGCC TAAAGAAGCT ATTCAAATGC
    AGATGAAGGA TCTTGAATTC CTTCAACAAC AAAACATAGA GTCTTAACAA
    TAGAGGTTGA GATGCCAAAA CATGTTTACT TTTTCAGTAC GGATTATTTT
    AAAAAATGCA ATCAACTTTT TTCAGTCATG AGCAAGTAAT TGTTACTGCA
    TAGGTTTCGA GATATGGTTG CTTCCTATCA TATCTTTTGA GAACTTGGAT
    TGATTCATTC AGTTTTTTAG ATGGTGTTTG CCGTATGGTA GATGTGTGAA
    TTTGCTCCAG TACATTGGAA CAACATTTGA AACTATAGGT AATAGAGTTA
    TAAACTTAGT TTTCAATAAG ATGTTTTTGT AAGACATTAA AATAATATAG
    TCCATCT

    Gene models with high sequence identity

    1. AT3G55250.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G55250.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 46 Blast hits to 46 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR