F24841

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F24841

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F24841

Determination of introduced cDNA(s)

  • RAFL09-83-M03 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-83-M03 - Resource: pda17864

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-83-M03 - full reading
    GCTCGCTATG GACGCTTGGA TCTCGTCTCT CAGGTTCGGG TCGGGTACGA 
    CCCATGTCTT GTGCTTCTTG TAAGCCTCTT CGAACGCCTC GTTGAACCGT
    CTCAGAGACT CCTCCGCCTC CGTCCCCGCC GTTGAATCAC CGGGGAGCGA
    CGCTATCACA TCCCCCCAGG CCATTTTTTC GTATTTCTCG AGGTATTGAT
    TCACTTTAAC CTCGTGATTC GCTACCCAAT CGTCTCCGAG TACGAGTCTG
    AGATTCGATG TACGGACCTT GGTCACAACG TAATGGAGGT TGTTCGCTAG
    GAAGAGATAC GATAGAGCCG AGTCGTTGTA GAGCCGAGAT TTGGCGTCGA
    TTTTACAGAG CAAGACGAGA ATCAACCACG CGAGTCTCGC CGCCATCGGA
    GAACGATCAC CGGATCCTGG ATTCTCTTCG CCGCTGCTAC TGAAGTAATC
    CTCCGGTAAA GGTAACGATG ACTCCTTGAG AATGGTGGCG AGAGAATCGC
    TGTAGTCTGC GAGGAAGACG ATGAAGTTCA TCACATACCT CGTGAGCTGA
    TGAACTCCGC CGCCAGAAAT CGCCGATTTC GACGATTCCT TCGTAATCGA
    CGATTGAAAC TCCGTCATCA TTGCATTCAC CGATTCCGAT AGCTTCTCTA
    GAGATTCATT CGCCTGTAAT CTAACGGCAG CGGTTGAATC GTAGCTAAAA
    ATCTGATCGA TTTTGGGAGT CAGTTGCAAG ATCGTCTGGT AAACGTCAAG
    CGTAGGGAAG ATCTTCTCTG CAGTTTTTCT GGATTTCGCT ACGGTTAGTG
    AGAAGATGAA GAGGTTTAAC GCGCTCTGTA GCGTTATGTC AACGAAGCAA
    GATTCAGCGA CGGAGGAGGA GAAAATGTGA TCGGAAAGGA TTCGTTCTCC
    GTTGAACAGA GTGGTGATTG CTACTCTCGC AACAATCACC CATATTTTGA
    TCTTCTTCTC CAGAATCTCC CATTCCAGTT TCTGCATCTG TGTAGAGAGG
    AGATCATGCA ATTTGCTATC ATCTTCAAAT CAACAATAGC ATCAGAATTC
    CCTCCTCCTC CTATGTCTTT ACCTAATTCC GATGAGGATT CAGAGTAAAG
    CTCTCCATCT GATGAAGAAT CCGAAGCGGT TCCACTTGAT CTCGAAGGTA
    TGTTGGATTC AGAAGACCAA CCAGAGACGG ATTCTGGACT CAGAAAGCGG
    CGATTCGATT TCAAAACCCG GTAAAACTCC TTCTCCAAAT GCTTCATAGC
    TTTCCGCATC AAATCCTGTC CTTTAGCAAG CTTAGCGGAG TCCGGATTCA
    TAGCAACGGT GCTCTGAATG GCGTATTGTA ACTTGCCGAG AACCTCGAGG
    AAGCGTCTGC CTTCTAGGCG GTTTTGAGCG GAGAAGAGGG AAGAGAGGCT
    GCATGAAGAA GAAGAAGAGT CGCAGAGGTG TGGAGTAACC CATTGGCATA
    TGAAGGCGTC AGCTGCCTCC ACACTATCGC CGATTAGAGA CTCGGAGAAG
    CCCTGTTGCT GTTGCGGCCC GACCTTAGAG GATTTTGATA AGGTGGTGGG
    TTTCAAGAGC ACCATTGTTT CTTGGGTTTG AAGAAATGGG TCTTAAGGTG
    TTGGGGTATT TATTTACCAT CTTCGGTTTC TTGTTTCGGC GACTGTTTTT
    TTTTGTTGGA GCCGTTCCAA GTTCGTCAAA ATGTACACGC TGGTCATCCG
    TTTATGTCTC TCATTTTGTT TTCTAAGTCT TTGATTTTGG GACAACAAAT
    AAAAAA

    Gene models with high sequence identity

    1. AT1G07728.1 [+] show detail - other RNA
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPanther EXOCYST COMPLEX PROTEIN EXO70 2.8e-134
    HMMPanther Exo70 exocyst complex subunit 2.8e-134
    HMMPfam Exo70 exocyst complex subunit 9.4e-92

    See the detailed result >

    AT1G07728.1

    Model type
    Other RNA
    Short Description
    other RNA
    Curator Summary
    Potential natural antisense gene, locus overlaps with AT1G07725
    Link
    InterPro Scan - TAIR