F25330

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F25330

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F25330

Determination of introduced cDNA(s)

  • RAFL06-73-F19 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-73-F19 - Resource: pda03439

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-73-F19 - full reading 
    CAGAGAAAAA GTTTGCAGTG AGAAGGAGAT TGATTAATCG ATCTGAGAAA 
    GATGGGAGAT TCGGAGTCAT TTGTTGGGAA AAATTGGAAT GGATTGAAGG 
    ATTTCTGGAG TGATAGGTTA TCATTTTTCG AAAATTACAC CAGATTCACC 
    AAACGCGACG CGCCTCTTCC TTCTTGGTCT TCCTCCGACG TCGAGGAATT 
    CATTGCCTCC GATCCCGTTC ATGGACCCAC CCTGAAAACG GCTAGGGAAG 
    CTGTGACGTT TGGTGTTACC GGAGCTGCAC TTGGAGCTGT CTCTACTGCT 
    GCTTTTGCCT GGAAATACTC CAGGAGTCCA CATGGTGCTG CATTGTCCTT 
    CTTAGGAGGA GGTGTTTTTG GTTGGACCTT TGGGCAAGAG GTCGCCAACC 
    ACACACTGCA ACTCTACAAG TTGGACACAA TGGCAGCCCA AGTTAAGTTC 
    ATGGAATGGT GGGAACGTAA GTCTCAATAA AGGTCCTGAA TCTAAAACGA 
    AGACGTGTGC TGCTTTCTCG TCCAGAGTAT CTTCTTGGGA ACAACATGAA 
    ATGCTGATTA TCCATCCATT TCCAGACTTT CGCCTTTGAA ACTTTTTCTA 
    TTCTCACTCT TGGAACATGT TTGCCTTGTC TTAATAATAC AACATGCCTC 
    ATGAATGTTT TGAAGATTTG AGAAAATGAA TTCAAAGAAA CCAAATGGTC 
    CC

    Gene models with high sequence identity

    1. AT1G08480.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G08480.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR