F25446

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F25446

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F25446

Determination of introduced cDNA(s)

  • RAFL05-04-I18 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-04-I18 - Resource: pda02444

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-04-I18 - full reading
    AGCTTAGCTT TCTGGTTTTT CTTCTTCTGC ACCTTAAATA TACGCCCAGA 
    AAATTCCTCT GGTCACCAAA CCAAACCAAA ACCGACTCTT TCTTTGAATT
    TCTGAAAGGA AACGATAAGG GTTTCGAGAA AAATCATTCC TTTTTGACTT
    AAAAGACGCG TTTCCACATT TTTGGCGTTT CTTCTCTGGG TTTGTTTTGT
    CTCTAGACGA AGACGATCAC GGGTTTTAAC ATATTCGTGT GTACGCGTGT
    ATCTCCAATT TTGCGAATAG GGTTTGAAGT AATCGTTTTG TTTGTGAGGA
    TAACGACTCG CGGGGTTACG CATAGCAGGT TCCTGGCTTC TCTACTGTCA
    GGAGGGGCCT TGAGTCTTTG GAGTTACCAC AGTAGACAGA ACCCCAGTGG
    GTGACTTTTT GAAAAGTCTT CTTGATTTAG TGCTGCACAT TTTCGCTGTG
    GAGCTACAAT CAGAATATTA GAGAAGATAT GGGAATCTTT TCACGCAGTT
    CAATTAGTAG GAAATCAAAA GATGGAATGA AGATCATTGC AACGGCATTT
    TTTGGAGTAA CATTTGGCTT TCTGATTGGA ATATCTTTTC CATCATTATC
    AATCACTAAG GTGAGTCTCC CTACAAACTT TCTTCCTTCA AACGATCTCT
    CATATATCGA GGAAAAGGGT TCGAAAATTG CAACTCCAGA AAGTCATAAA
    GCTTGGTCAT CATCAAAGGG TAACGATAGC AGCTCATCTA CTCCGATTGA
    CAAATCAAAG ATCTGGGTAC CTTCTAATCC TCGTGGTGCT GAAATGTTGC
    CACCGGGTAT GGTTGCTGCT GAATCAGACT TCTATTTGCG CAGATTATGG
    GGTTTACCGC ATGAGGATTT GAAAAGTGAA CCAAGATACC TCGCAACATT
    TACAGTGGGT ATTAATCAGA AAGCAAATAT CGATGCTTGT GTCAAGAAGT
    TTTCAGAAAA CTTCACTATT GTCCTGTTTC ACTATGACGG CCGGGTAACT
    GAGTGGGATG AGTTTGAATG GTCAAAGACT GCTATACACA TTAGCGTACG
    AAAGCAGACA AAATGGTGGT ATGCAAAGAG GTTTTTGCAC CCTGATATTG
    TAGCAAGATA TGATTATATC TTCGTCTGGG ATGAAGACCT GGGTGTCGAG
    CATTTTAACG CAGAAGAGTA CGTAAAGATG GTGAAGAAGC ACGGCCTGGA
    GATTTCCCAA CCTGGCTTGG AACCAAACCA GGGACTAACG TGGCAAATGA
    CAAAGAGACG AGGAGATATG GAAGTTCACA AGATAACAGA AGAAAGACCT
    GGATGGTGCT CAGATCCTCA TCTCCCTCCA TGTGCTGCAT TCGTAGAGAT
    CATGGCTCCT GTATTTTCAA GAAATGCCTG GCGATGCGTG TGGCATGTGA
    TCCAGAATGA TTTGGTACAC GGTTGGGGTC TTGACTTTGC ACTCAGAAGA
    TGTGTTGAGC CTGCACATGA GAAGATAGGA GTAGTTGATT CTCAATGGGT
    CGTTCATCAA TCTTTTCCTT CCCTTGGCAA CCAAGGTGAG GCGACAGACG
    GGAAAGCACC ATGGCAAGGG GTGAGGGATA GATGCAAAAA GGAATGGACA
    ATGTTCCAGA GTAGAATGGC TAACGCAGAG AAGGATTATT TCAAATCCTT
    ACAAGTAGAA GGCTCCTCAA ATTCAACAGC CACAACCATT TAATAGGAGA
    GTTCTTAAAG TAGCTAGACG CTGACAGATT CAGTTTTACT AGTGCGTTCT
    TGCATTTACA TATAGAGTCT GTATATGTTA ATGTAGTAGA TATTACCCAT
    CACTACAAAA TCATCACCAA CCTTCCATCG AATAAACAAA AAAAGATGAA
    TGTTTTGAAC CGCC

    Gene models with high sequence identity

    1. AT1G67850.1 [+] show detail - Protein of unknown function (DUF707)
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G67850.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF707)
    Computational Description
    Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 324 Blast hits to 323 proteins in 26 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR