F26137

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F26137

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F26137

Determination of introduced cDNA(s)

RAFL05-16-L12 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-16-L12 - Resource: pda07364

full reading [+] show sequence

CACCACTACA ACCACCGCAA CAACCACCAA AAACCCTCTC AAAGAAATTT 
CTTTTTTTTC TTACTTTCTT GGTTTGTCAA ATATGGTCAG CCATCCAATG 
GAGAAAGCTG CAAATGGTGC GTCTGCGTTG GAAACGCAGA CGGGTGAGTT 
AGATCAGCCG GAACGGCTTC GTAAGATCAT ATCGGTGTCT TCCATTGCCG 
CCGGTGTACA GTTCGGTTGG GCTTTACAGT TATCTCTGTT GACTCCTTAC 
GTGCAGCTAC TCGGAATCCC ACATAAATGG GCTTCTCTGA TTTGGCTCTG 
TGGTCCAATC TCCGGTATGC TTGTTCAGCC TATCGTCGGT TACCACAGTG 
ACCGTTGCAC CTCAAGATTC GGCCGTCGTC GTCCCTTCAT CGTCGCTGGA 
GCTGGTTTAG TCACCGTTGC TGTTTTCCTT ATCGGTTACG CTGCCGATAT 
AGGTCACAGC ATGGGCGATC AGCTTGACAA ACCGCCGAAA ACGCGAGCCA 
TAGCGATATT CGCTCTCGGG TTTTGGATTC TTGACGTGGC TAACAACACC 
TTACAAGGAC CCTGCAGAGC TTTCTTGGCT GATTTATCAG CAGGGAACGC 
TAAGAAAACG CGAACCGCAA ACGCGTTTTT CTCGTTTTTC ATGGCGGTTG 
GAAACGTTTT GGGTTACGCT GCGGGATCTT ACAGAAATCT CTACAAAGTT 
GTGCCTTTCA CGATGACTGA GTCATGCGAT CTCTACTGCG CAAGCCTCAA 
AACGTGTTTT TTCCTATCCA TAACGCTTCT CCTCATAGTC ACTTTCGTAT 
CTCTCTGTTA CGTGAAGGAG AAGCCATGGA CGCCAGAGCC AACAGCCGAT 
GGAAAAGCCT CCAACGTTCC GTTTTTCGGA GAAATCTTCG GAGCTTTCAA 
GGAACTAAAA AGACCCATGT GGATGCTTCT TATAGTCACT GCACTAAACT 
GGATCGCTTG GTTCCCTTTC CTTCTCTTCG ACACTGATTG GATGGGCCGT 
GAGGTGTACG GAGGAAACTC AGACGCAACC GCAACCGCAG CCTCTAAGAA 
GCTTTACAAC GACGGAGTCA GAGCTGGTGC TTTGGGGCTT ATGCTTAACG 
CTATTGTTCT TGGTTTCATG TCTCTTGGTG TTGAATGGAT TGGTCGGAAA 
TTGGGAGGAG CTAAAAGGCT TTGGGGTATT GTTAACTTCA TCCTCGCCAT 
TTGCTTGGCC ATGACGGTTG TGGTTACGAA ACAAGCTGAG AATCACCGAC 
GAGATCACGG CGGCGCTAAA ACAGGTCCAC CTGGTAACGT CACAGCTGGT 
GCTTTAACTC TCTTCGCCAT CCTCGGTATC CCCCAAGCCA TTACGTTTAG 
CATTCCTTTT GCACTAGCTT CCATATTTTC AACCAATTCC GGTGCCGGCC 
AAGGACTTTC CCTAGGTGTT CTGAATCTAG CCATTGTCGT CCCTCAGATG 
GTAATATCTG TGGGAGGTGG ACCATTCGAC GAACTATTCG GTGGTGGAAA 
CATTCCAGCA TTTGTGTTAG GAGCGATTGC GGCAGCGGTA AGTGGTGTAT 
TGGCGTTGAC GGTGTTGCCT TCACCGCCTC CGGATGCTCC TGCCTTCAAA 
GCTACTATGG GATTTCATTG AATTTTAGCA GTGGTTGTTT GGCTCTCTTT 
CTCTCATAAA ACAGTAGTGT TGTGCAAATC CTACATAAAG AAAAAAGAAA 
AGGAAATTAA ACTCATTGGG TTGGTTTGTA TTTTACCTAA ACCCACGAAG 
TTCCTTTTTC TTTTTGTAAC TCAATTTAAA TTTGGAGTAT ATTTTACT

Gene models with high sequence identity

AT1G22710.1 [+] show detail - sucrose-proton symporter 2
E-value: 0; Score: 99.94

InterPro Scan Digest

Program	Description	E-value
superfamily	Major facilitator superfamily, general substrate transporter	3.8e-27
HMMPanther	SUCROSE TRANSPORT	1.5e-231
HMMPanther	SUGAR TRANSPORTER	1.5e-231
HMMPfam	General substrate transporter	3.8e-11
HMMTigr	Sucrose/H+ symporter, plant	1.1e-236

See the detailed result >

AT1G22710.1

Model type: Protein coding
Short Description: sucrose-proton symporter 2
Curator Summary: Encodes for a high-affinity transporter essential for phloem loading and long-distance transport. A major sucrose transporter, AtSUC2 can also transport a wide range of physiological and synthetic glucose conjugates with both α- or β-linkage.
Computational Description: sucrose-proton symporter 2 (SUC2); CONTAINS InterPro DOMAIN/s: Sucrose/H+ symporter, plant (InterPro:IPR005989), Major facilitator superfamily MFS-1 (InterPro:IPR011701), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: sucrose-proton symporter 1 (TAIR:AT1G71880.1); Has 2329 Blast hits to 2203 proteins in 568 species: Archae - 32; Bacteria - 908; Metazoa - 423; Fungi - 192; Plants - 420; Viruses - 0; Other Eukaryotes - 354 (source: NCBI BLink).
Link: InterPro Scan - TAIR