F26220

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F26220

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F26220

Determination of introduced cDNA(s)

  • RAFL05-14-I02 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-14-I02 - Resource: pda02596

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-14-I02 - full reading 
    AAAAACGCAA ACGTACAAGT AGTGAAGTAT CACGACTTTG ATTTATTTCT 
    GTATATCTAA GATGCAGGCG GTATCAGTTG ATGAAACCAA AAACACGGTG 
    GTGCTACGGG CGGAGCACAA GAATGAAGAA GGCCGGAAAT CTGTTGATAA 
    GTTCGAAGTG AAGACACGTA ATCCGGAGAC GATCAAGAGC GTTGAGCGGA 
    AGCTTATGGA GAAAGGTGTT CAACGGATGG ATCGTCATCC TTCCGATGGG 
    ATTCCTCTCA GGCGACCACC ATCGAAGTCA GGTCACGGCG GGAAGTACAC 
    GTGGGAAGGA CCTGATCGGA TGGAGGATTA CGAGATGCAG CCGGATCCAC 
    CGGCGATGGA TGAAGGAGAT CCTAATTACG ACGAGGAACA GGTGAAGAAG 
    AGTGGTGATG ACGTGGCGGT TGAGCTTGTG AAAGGAGAGG TTGAGGTGGC 
    TAAGGAGGCT CCGGCTGGTG TTGCTAGGGT TGAGGTTGAT CCTCGCTTGG 
    TCGGTCGTTG AGAGTTTGAT AGAGGAGGAA GAAAAATGTT GGGGCGAATG 
    TGAGAAAGAG GGAGAAATGT GGGGTTGGAT TTTTAATTTC GAGTTAATGT 
    TTTAGTGTAA AATGACTTTT CACTATTTCT GTAAAAAATA ATAATTGATC 
    TGCTAAC

    Gene models with high sequence identity

    1. AT3G10020.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative str...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT3G10020.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 47 Blast hits to 47 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 46; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR