F26418

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F26418

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F26418

Determination of introduced cDNA(s)

RAFL09-24-B02 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-24-B02 - Resource: pda08060

full reading [+] show sequence

AACAAGTCAC ACACTTAAAA CAAAACAAAA CAAAACAAAA ACAGAGCACA 
CAAAAAGAGA AACCAAGTTT TCTTAAAAAT GGAGCTAGAA TCTTCTCCTC 
CTCTACCTCC TCATGTGATG CTCGTATCTT TTCCAGGGCA AGGCCACGTT 
AATCCACTTC TTCGTCTTGG TAAGCTCTTA GCTTCAAAGG GTTTGCTCAT 
AACCTTCGTC ACCACTGAGT CATGGGGCAA AAAGATGCGA ATCTCCAACA 
AAATCCAAGA CCGTGTCCTC AAACCGGTTG GTAAAGGCTA TCTCCGGTAT 
GATTTCTTCG ACGACGGGCT TCCTGAAGAC GACGAAGCTA GCAGAACCAA 
CTTAACCATC CTCCGACCAC ATCTAGAGCT GGTCGGCAAA AGAGAGATCA 
AGAACCTTGT GAAACGTTAC AAGGAAGTAA CGAAACAGCC CGTGACATGT 
CTTATCAACA ACCCTTTCGT CTCTTGGGTC TGTGACGTGG CAGAAGATCT 
TCAAATCCCT TGTGCTGTTC TTTGGGTTCA ATCTTGTGCC TGCTTAGCTG 
CTTATTACTA TTACCACCAC AACCTAGTTG GCTTCCCGAC CAAAACAGAA 
CCCGAGATCG ATGTCCAAAT CTCTGGCATG CCTCTCTTGA AACATGACGA 
GATCCCTTCT TTCATTCACC CTTCAAGTCC TCACTCCGCT TTGCGAGAAG 
TGATCATAGA TCAGATTAAA CGGCTTCACA AGACTTTCTC CATTTTCATC 
GACACTTTCA ACTCATTGGA GAAAGACATC ATTGACCACA TGTCGACGCT 
CTCTCTCCCC GGTGTTATCA GACCGCTAGG ACCACTCTAC AAAATGGCTA 
AAACCGTAGC TTATGATGTC GTTAAAGTAA ACATCTCTGA GCCAACGGAT 
CCTTGCATGG AGTGGTTAGA CTCGCAGCCA GTTTCCTCCG TTGTTTACAT 
CTCATTCGGG ACCGTTGCTT ACTTGAAACA AGAACAAATA GACGAGATCG 
CTTACGGTGT GTTAAACGCC GACGTTACGT TCTTGTGGGT GATTAGACAA 
CAAGAGTTAG GTTTCAACAA AGAGAAACAT GTTTTGCCGG AAGAAGTTAA 
AGGGAAAGGG AAGATCGTTG AATGGTGTTC ACAAGAGAAA GTATTATCTC 
ATCCTTCAGT GGCATGTTTC GTGACTCACT GTGGATGGAA CTCAACGATG 
GAAGCTGTGT CTTCCGGAGT CCCGACGGTT TGTTTTCCTC AATGGGGAGA 
TCAAGTCACG GACGCCGTTT ACATGATCGA TGTTTGGAAG ACGGGGGTGA 
GGCTAAGCCG TGGAGAGGCG GAGGAGAGGT TAGTGCCGAG GGAGGAAGTT 
GCGGAGAGGT TGAGAGAGGT TACTAAAGGA GAGAAAGCGA TCGAGTTGAA 
AAAGAATGCT TTGAAGTGGA AGGAAGAGGC GGAGGCGGCG GTTGCTCGCG 
GTGGTTCGTC GGATAGGAAT CTTGAAAAGT TTGTGGAGAA GTTGGGTGCC 
AAACCTGTGG GGAAAGTACA AAACGGGAGT CATAATCATG TCTTGGCTGG 
ATCAATCAAA AGCTTTTAAA AAGTCATTTA AGTTTTTTTG TTTTTTGCCT 
TTGGTTTCTG CAAATTCGTA ATTGTGTTTG TATCCATCCT CCCATTGTGT 
TCTTTGTTTT TCTGTTTACT ATTTTTTTTT GGTATGGGTC TAGGGGAGAG 
TCAATGACCT TACTGAAGAA TGTCAGTCAC GCATTAAAAA ATATATTATT 
AATGGTTAAT ACTATATCTT GCAAAAAAAA AAAAAAAA

Gene models with high sequence identity

AT3G21560.1 [+] show detail - UDP-Glycosyltransferase superfamily protein
E-value: 0; Score: 99.89

InterPro Scan Digest

Program	Description	E-value
HMMPanther	UDP-GLUCOSYLTRANSFERASE	1.7e-127
HMMPanther	UDP-glucuronosyl/UDP-glucosyltransferase	1.7e-127
PatternScan	UDP-glucuronosyl/UDP-glucosyltransferase	0
superfamily	UDP-Glycosyltransferase/glycogen phosphorylas	4.9e-51
HMMPfam	UDP-glucuronosyl/UDP-glucosyltransferase	1.1e-25
Gene3D	no description	3.7e-17

See the detailed result >

AT3G21560.1

Model type: Protein coding
Short Description: UDP-Glycosyltransferase superfamily protein
Curator Summary: Encodes a protein with sinapic acid:UDP-glucose glucosyltransferase activity. Mutants defective in this gene are hyper-fluorescent (which accumulate in their trichomes a compound that is likely to be 3',5'-dimethoxynaringenin chalcone or sinapoyltriacetic acid lactone, potential products of the concerted action of 4-coumarate CoA ligase and chalcone synthase on sinapic acid).
Computational Description: UGT84A2; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15490.1); Has 7875 Blast hits to 7793 proteins in 474 species: Archae - 0; Bacteria - 315; Metazoa - 2199; Fungi - 84; Plants - 5106; Viruses - 112; Other Eukaryotes - 59 (source: NCBI BLink).
Link: InterPro Scan - TAIR