F26432

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F26432

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Original: F26432

Determination of introduced cDNA(s)

  • RAFL09-95-L11 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-95-L11 - Resource: pda09100

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-95-L11 - full reading 
    GTCACATGTT TCGTAACCAA CTTGTCCACA AACTCTTTAA AGTTCATATC 
    AGATGATCCA CCGTCCGCCA CGGCGGCCTC GGCCTCCGCC TTCCACCTCC 
    GAGCGTTTTC TCTCAGCTCC ACCGCCTTTT CCCCAACTGT GGCCTCAAGC 
    AGCTTCTCTG CTACAACCTC CCTCGAAACA ATCATCTCCT CAGCGGCTCC 
    GCGGCCTAGT CTCACTCCTG TCTTGAAAAC ATCAGCCAAG TACACCGCAT 
    CAGTCACTTG ATCTCCCCAT TGCGGAAAAC AAACAACGGG GACTCCGGCA 
    GTTAAAGCCT CCATTGTCGA GTTCCATCCG CAGTGACTTA AGAAACAAGC 
    AATCGCAGGA TGAGCCAAGA CTCTCTCTTG GGGACACCAT TCCACGATTT 
    TACCCTTTTC TTCGAGCTCT CGAGGCAAAA CATGTGGTTC TACAAATGTC 
    CCTTCCATGG GAGGCCGAAC CACCCATAAG ACCGACAAGC CAGAGCTCAA 
    AACGCCATGA GCGATCTCCT CCATCTGCTC TTGCTTCAAG TTGGCTATAG 
    TCCCAAAGGA GATGTAAACG ACTGAGGATG GTTCTCTTGA GTCAAGCCAT 
    TCCATGCAGT CACTCGCTGG CTCGGATATA TCTCCCTTAA CGTCAGAACT 
    CAAGGTTTGA GCCATCTTGA AGAGCGGACC GACAGGACTG ATGATGGCTT 
    GAGGACAAAG TTGTGACATG TGGTCCATGA TGTCTTTTTC TAGTTCGCGA 
    AAAGTGTCGA TGAAAAGATA GAAAGACTTG TGGTTTTCGA ATCTCTTTAA 
    CTGGTCTAAA ATGATATCTC CAAAAGCTGT ATACGGAGAC GAAGGGTGAA 
    GAAAGCTTGG GATCTCGTCA TGCTTTAACA ATGGCAAGCA AGGGATTTCA 
    ACGCTGATGT CCGGCTCGGT TTTGGTCGGG AACTTAACTA ACCGGTGGTG 
    GTAATAGTAA TAAGCCGTGA GACAAGCACA AGACTGGACC CATAGAACAG 
    CCGAAGGGAT GTGAAGCTCC TCGGCGACAT CACATACCCA TGGGACAAAA 
    GCGTTGTTTA TGAGACACGT CACCGGCTCC TTGTTATATC TCTTAACGAG 
    ATTCTTGATC TCTTGTTTTC CGACAGCTTC AAGGTGTGGT CGGAAGGCAT 
    CGAAGTCGAA TCTTTTTTCA TCGTCGTCGG CGAAGCCGTC AGAGAAGAAC 
    TCAAACCGGA TGAAACCTAG ACCGACCGGT TTGAGCACAC CGTCTTGAAT 
    CTTGTTGGCT TGACGCATCT TCTTGCCCCA TGGCTTCTCT GTGGTGACAA 
    AGGTGACGAG TAAGCCTTTA GAGGCTATGA GCTTTCCGAG ACGAAGTAGA 
    GGGTTTACGT GACCTTGGCC GGGGAAAGAT ACGAGCATCA CATGAGTATG 
    ACGAGACGGG TCCATGGATT TCTAGTTTCT TTAAGAACTA GAAAGTGGTT 
    TTGTTTTCTT TACACTATCA AATTTATGTG AACACCTAAA ACAAAATATC 
    AAAAGAAAGT AACAAAACGA GTGGCAAAAA CATACACTTC TCTTCTTCTT 
    TGTCTTTTAC TCTTCGTCGA ATCTTGGACG ATCTCTATTC TGAGTCCATG 
    TATAGTACAT ATCCCTTTCC AGTGCTTTCC ATCAATTATA AAGGGAAATA 
    TTTTTTT

    Gene models with high sequence identity

    1. AT4G15490.1 [+] show detail - UDP-Glycosyltransferase superfamily protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    PatternScan UDP-glucuronosyl/UDP-glucosyltransferase 0
    Gene3D no description 7.5e-19
    HMMPfam UDP-glucuronosyl/UDP-glucosyltransferase 4.5e-25
    superfamily UDP-Glycosyltransferase/glycogen phosphorylas 1.6e-50
    HMMPanther UDP-GLUCOSYLTRANSFERASE 2.6e-128
    HMMPanther UDP-glucuronosyl/UDP-glucosyltransferase 2.6e-128

    See the detailed result >

    AT4G15490.1

    Model type
    Protein coding
    Short Description
    UDP-Glycosyltransferase superfamily protein
    Curator Summary
    Encodes a protein that might have sinapic acid:UDP-glucose glucosyltransferase activity.
    Computational Description
    UGT84A3; FUNCTIONS IN: UDP-glycosyltransferase activity, sinapate 1-glucosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT4G15500.1); Has 8054 Blast hits to 7973 proteins in 495 species: Archae - 0; Bacteria - 428; Metazoa - 2313; Fungi - 57; Plants - 5089; Viruses - 102; Other Eukaryotes - 65 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR