F26814

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F26814

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T1  
rosette leaf (PO:0000014)
  • present in greater numbers in organism (PATO:0000470)
    (Rosette leaf::Number::many)
stem (PO:0009047)
  • abnormal (PATO:0000460)
    (Stem::Others)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F26814

Determination of introduced cDNA(s)

  • RAFL06-70-C03 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-70-C03 - Resource: pda07642

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-70-C03 - full reading 
    ATAGATCGTC AAAACCTGCC TAATAATGTC TTATCCTCAC ATAACACCTT 
    TTTTTTTATC TCCATCTCTC TGTTACTTAG AACCCTCCAT TCATATATAC 
    ACTAGGTGCC AAATTTGGTC ACGTGTTTGG CCCTTCACGT TCTTGACTCT 
    TAGCTAGATC CTTGTTTCTT GTGGATTCTT GAATCTTAAA TCTTGAATCC 
    CTGAGTTTTG TTGGTTCTTG ATTTTGATTC TCGATTCTTT AGTCATTGAT 
    TATTCGATCT TTGTTGGTTT TTGATTAGAG ATTTAATTAG CATATTTATG 
    TACTAATAAT TGAATAAATG GGAACAGGGG AGATATGATA CTTACAAGAA 
    GAAAAGTGGA CAGATTCCTC GGTTTGGAGA ATGGGAAGAA GCAAATGAGA 
    TGCCAATAAC ACAATACTTT GAGAATCCAA GACAAGCTGA AGCCTTAAAG 
    CTTGCTTCTC ACCATCCCCG TCCACGTCAC CTCCACGCTC AAAGACAGAC 
    GGCGGGGACG AAGGAGAAAA GAGGACCACA AAGGCGTGTG CGTGACGTCA 
    GTGCACAGTC GGACAAGTAT TACATTGACG TCAACGGTGT TAAGCAGTTC 
    AAAAACGACG TTGCTCTGAC TTGTAAGCCA CCTAAGCCCG TTGATGAAGA 
    TCTCTACAAG ATTCCTCCTG AGTTTATCCA TTCTTCAACA AGGAAGAGAA 
    GGCCTAGCTT TTTAGCTTGT TTGGTTCCAT GCGCATGAAT CGAAAAGGAA 
    GAGCGAAGAA GAAGAAGAAA AAGTAGGATC ATGAATGAAT AATGTAATTT 
    GTTTTTTGTT TTTGTAATTT CATCCTAATA TACAGATATG ATATATACGT 
    GGTTTGACAA AAAAAAAAAA AAAA

    Gene models with high sequence identity

    1. AT5G18310.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 99.81

     

    InterPro Scan Digest

    See the detailed result >

    AT5G18310.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48500.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR