F26844

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F26844

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F26844

Determination of introduced cDNA(s)

  • RAFL05-17-O21 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-17-O21 - Resource: pda03040

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-17-O21 - full reading 
    ATCCTCGCGT CGCGCCTTCT TGTCTTCTCT CTCAATCCAG CATATTCCTA 
    CGCAAATCCC TTATCGTTTT CATGTTTGTC CTGGTTTAAA TCTTCAATCT 
    CCTACCCGGT CTTTTCATCC TCCGATGGCA TTCCTTGTTC GTTCGCCGGA 
    GATACCCACC GTCTCGGCGA GAATCTTCTC CGATGCGAAT TCGAGTGTTA 
    TTAGTCATGT GTTTATGAGG AGGAAGGCTA CGGTTTCGGC GATTGACGCC 
    AGAGATTTGC CTGGTGTTAA GAATCCGAAA TCGAGATTGT ACTGGCAATT 
    CTCAGCTCCG GTGAAAGAAG ACTACAAGAT TAGCAGAGAG GAGGAAGAAG 
    AAGAAGAAGA AGATAAGCAG AGTTACTACG TGAATATGGG TCACGCCGTT 
    CGTAGTATCA GAGAAGAGTT TCCTTTGTTG TTCTACAAAG AGCTTAATTT 
    TGACATTTAC AGGGATGATA TTGTTTTCAA AGACCCTATG AACACTTTCA 
    TGGGAATTGA TAACTACAAA TCCATATTTG GGGCCTTACG TTTCCATGGA 
    AGGATCTTCT TCAGAGCACT ATGTGTGGAC ATTGTTAGTG TTTGGCAACC 
    CACAGAGAAC ACTCTGATGA TACGATGGAC TGTTCATGGA ATTCCTCGTG 
    GTCCGTGGGA GACTCGTGGT CGATTCGATG GTACTTCTGA GTATAAATTC 
    GATAAGAATG GCAAGATTTA TGAGCATAAA GTCGATAACA TAGCCATTAA 
    TTCGCCTCCA AAGTTTCAAA TGCTCACTGT TCAAGAGCTT GTTGAAGCCA 
    TTAGCTGCCC TTCGACTCCC AAGCCGACCT ACTTTGAGTT CGGAGATTGA 
    TTCATCATCA TCGTCTGAAA CATCATGCTG GTGTTATGTA TACTAGTAGT 
    CTTTTGTGTG GTTATAAATA GAGTGGTACT GTAATATAGA TGAAGAAGGA 
    ACGATTTAAA ATAAACCCAA TAGCATGAAT ACATTACACG CTTTTTTTGC 
    GTATAATAAT CAATAAAACG CCTATATGTA CATAAATTTG G

    Gene models with high sequence identity

    1. AT2G46220.1 [+] show detail - Uncharacterized conserved protein (DUF2358)
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT2G46220.1

    Model type
    Protein coding
    Short Description
    Uncharacterized conserved protein (DUF2358)
    Computational Description
    Uncharacterized conserved protein (DUF2358); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2358 (InterPro:IPR018790); BEST Arabidopsis thaliana protein match is: Uncharacterized conserved protein (DUF2358) (TAIR:AT1G16320.1); Has 199 Blast hits to 199 proteins in 64 species: Archae - 0; Bacteria - 74; Metazoa - 19; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR