F27145

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F27145

Determination of introduced cDNA(s)

RAFL04-17-B14 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL04-17-B14 - Resource: pda00637

full reading [+] show sequence

ACGACCACAG CCTTTAGCTT ATTTGTGTGG CGAAGAGAAG AGATAACATT 
CCTAAGCAAA TCTCTTCTCT CTCCCATTCG TCTCCAAAGA GATTACAGTT 
TTGAGCATTT CTCATCTCTC GAAGCTCTTC TCTGTGTGTG TGGCGATGGC 
TGCTAATTCG ATAATGGCTT CCTCCAAACC CCTAATCTCC CTGTCATCCA 
ACCAACAACC AAACCGAGTC CAAATTCCCA AATTCGCCAA ACTTCCCCAA 
ATTCCCAAAT CCCTCACTTC CTCCACCGAT CTCCGTAGCA AAGCACTATC 
ACTCTCCTCC GCCACCGCCA AATCCTTAGC TTTAATCGCC GCTTTCGCTC 
CTCCGTCGAT GGCGGAGGCG ATGGAGAAAG CACAGCTCTT CGATTTCAAT 
CTCACGCTTC CGATCATCGT TGTTGAGTTT CTCTTCTTGA TGTTCGCTCT 
CGACAAGGTC TATTACTCTC AGCTTGGTAA CTTCATGGAT CAAAGAGACG 
CTTCCATCAA AGAGAAGCTC GCGAGTGTTA AGGACACTTC GACTGAAGTA 
AAGGAGCTCG ATGAGCAAGC CGCCGCCGTG ATGAGAGCAG CTAGGGCTGA 
GATCGCCGCC GCGCTTAACA AGATGAAGAA GGAGACTCAG GTTGAAGTCG 
AGGAGAAGCT AGCGGAGGGA AGGAAGAAGG TGGAGGAAGA GCTAAAAGAA 
GCTTTGGCGA GCTTGGAGAG TCAGAAAGAA GAAACCATTA AAGCTTTGGA 
TTCTCAGATT GCTGCTCTTA GTGAAGACAT TGTCAAGAAG GTTCTTCCTT 
CTTAAATTAT ATTTTTGTTA ACTGTGTAAT TCTCTGTCTC TCTATCTCAA 
AACTTATTTA CAAGAAATTA CTGTAAATCT CTTCTTCTTC TTCTTCTCTG 
TTTCTTGGAT TGTTCGTCGT TCAAAGAAGA ACAATTTTTA TTTTGTAAGT 
TTATAAATAA TTAGCTCTCT TCTGT

Gene models with high sequence identity

AT4G32260.1 [+] show detail - ATPase, F0 complex, subunit B/B', bacterial/chloroplast
E-value: 0; Score: 99.90

InterPro Scan Digest

Program	Description	E-value
HMMPfam	ATPase, F0 complex, subunit B/B', bacterial/chloroplast	9.6e-30
Coil	coiled-coil	0
Coil	coiled-coil	0

See the detailed result >

AT4G32260.1

Model type: Protein coding
Short Description: ATPase, F0 complex, subunit B/B', bacterial/chloroplast
Computational Description: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B/B', bacterial/chloroplast (InterPro:IPR002146); Has 2587 Blast hits to 2581 proteins in 935 species: Archae - 6; Bacteria - 1820; Metazoa - 10; Fungi - 8; Plants - 73; Viruses - 1; Other Eukaryotes - 669 (source: NCBI BLink).
Link: InterPro Scan - TAIR