F27310

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F27310

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F27310

Determination of introduced cDNA(s)

  • RAFL05-15-D05 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-15-D05 - Resource: pda01304

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-15-D05 - full reading 
    ATCAAACCTC AACAAAAATA CTCTCTCTTA TTTCAGACTT TTCAGACAAA 
    AACAGAGAGA AACTTTTTGT GTTTATGTGT TTTAAGATCT GATTGATAAA 
    AAAGATGCAA GTTATTTCTC CTTCGTCTCC GGCGCCGAGA TTCGCCGGAA 
    AAGAGAGATT TTCAGAAGTT TACGGCGAAC TAAACGACGA TTTTGGCTCT 
    AAACTGAAGA TTAGTTCTAA AGAGGAAGAA AACAGAGATG ATGATTCATG 
    GTGGAATCAG AACGGAACTG ATAAAGATGA TGAAGGAAGA GAAGAAGATT 
    TCTCATTCGC AAGTGTAAAC GCAGATAATT CACCGATAAC CGCAGATGAA 
    GCATTCGAAG ACGGTCAGAT CCGACCGGTT TATCCTCTGT TTAACCGGAA 
    TATTTTCTTC GATGATCCAG AGGAAAAAAC TTTACGTTCA CCTCTCAAGA 
    AACTCTTCGT TGAATCCACA ACCACAGAAG AAGAAGAAGA AGAGTCAGAT 
    ACGGTGGGTC CATATTGTTC ATGGACAAAT CGTACGGTGG AGCAAGCATC 
    ACCAGAGACT TGTCGGAAAA GTAACTCAAC AGGGTTCTCA AAGCTATGGA 
    GATTTAGAGA TCTTGTTTTG AGAAGTAACA GTGATGGAAA AGATGCGTTT 
    GTGTTTTTAA GCAACGGCTC TTCATCTACA TCGTCGACGT CGTCTACGGC 
    GGCGAGATTG AGTGGTGTGG TGAAGTCGTC GGAGAAAGGG AAAGAGAAAA 
    CGAAGACGGA TAAGAAGAAG GATAAGATGA GAACGAAATC GGCACATGAG 
    AAATTGTATA TGAGAAACAG AGCAATGAGA GAAGAAGGGA AACGAAGATC 
    GTATCTTCCG TATAAACATG TTGGGTTCTT CACTAATGTT AATGGTTTAA 
    CCAGAAATGT TCATCCCTAT TGATTAAACC GATCTGTCGT ACCAAAATCT 
    CTACCGACAA ATCTTTGCCT TTTGTATATA TCTAACCTTT TTTTTGGTTT 
    CTGTGTATTA TAAAACCTTC TTTTTGTAAG TAAAAGTGAA ACTTTACTTA 
    TTAACTTTTC GTTTGTATCA TTTGATTAGT TTTTTTTCTT CTTTGATGTA 
    AAGTATTTTT TGATTTTGAA AGTAGTAGAG AAAAGATTCA CC

    Gene models with high sequence identity

    1. AT1G70420.1 [+] show detail - Protein of unknown function (DUF1645)
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G70420.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF1645)
    Computational Description
    Protein of unknown function (DUF1645); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1645 (InterPro:IPR012442); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF1645) (TAIR:AT1G23710.1); Has 179 Blast hits to 179 proteins in 22 species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0; Plants - 162; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR