F27402

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	whole plant (PO:0000003)	decreased height (PATO:0000569) (Adult plant::Plant height::short)
	cauline leaf (PO:0000013)	abnormal (PATO:0000460) (Cauline leaf::Others)
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) abnormal (PATO:0000460) (Rosette leaf::Others) abnormal (PATO:0000460) (Rosette leaf::Others)
	sporophyte vegetative stage (PO:0007134)	decreased speed (PATO:0000304) (Adult plant::Growth::slow)
	fruit (PO:0009001)	decreased length (PATO:0000574) (Silique::Shape::short)
	stem (PO:0009047)	present in fewer numbers in organism (PATO:0001997) (Stem::Number::few)
T2
	cauline leaf (PO:0000013)	decreased size (PATO:0000587) (Cauline leaf::Shape::small)
	rosette leaf (PO:0000014)	increased width (PATO:0000600) (Rosette leaf::Shape::wide)
	stem (PO:0009047)	present in fewer numbers in organism (PATO:0001997) (Stem::Number::few)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F27402

Determination of introduced cDNA(s)

RAFL05-14-L06 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-14-L06 - Resource: pda07311

full reading [+] show sequence

TATTGCGCGG CATCTCTCTC GTCTTCCTTT ACTCCGTCAA AACCATGTTT 
CTAAGTCAGT GCCGGAGCTG TAAACCTTTG CTCGAGTCTC GTATACCTTT 
GCTCCGCCTC TCTCTCTCTA AATGTCTCGA TCAGTCCTTC AAAACCACGG 
CTAGTAGCGA ATACGGTAGT AAGATCCCTG ATGCTCTTCT GGGACATCGA 
AGACTGGAAG ATCATAAGGC AAGCGTCTTC TGGGACGTGG AGGACTACAA 
GATCCCTGAT GGTCTCAGTG CTGGTGAGGT TTCGAAGAAC ATCAATACGG 
CTTTTGCGAA AATGGGATAT CCTGGTACGG TCTCAATCAA GGCTTATGCT 
GATGAGACGA ATCAGAGGAT CCAGGATAAG GAGTTTCACT CCGCCGGTAT 
CGAGCTCAAG CGCGTACCAG AAGGCTTGAA AGGAAAGGAT CATTCGAGAG 
ATATAGCTGT TTTAACTGGC ATGGGGGTGT GGATTACTGT CAATCGTGAT 
GTATCATCAT CGATAATGCT AATCTCAGAT AGCATCTACG GTTTTGCTGT 
AGACGAGTTT AAGAAGGTGA ATCATTATGT TCTTTGGAAA AAACTATCAG 
CTAAGGGCAA GCCTATCGCC CAGACCAGAA GATACTCTAA ACGTTGAGAC 
CAGATATACT TGGTTCTCTC CATGCTAATT GTTGGGTTTT GAATAAGTCA 
ATCACTAAGT CAAGTCTTAG CTTGTTTTTA GGAACTGATT GAGTTTTCTT 
GTTTTGAGTT TGTTTCGTTT TTCAGTTCCG TTTCTTATTC CTTAGTTTTC 
GTATTCACGT TGTAAGGCTC TTATAAAAGC CAATTTCAGT CTAATGAATT 
AAACACGAAT CATTCAGC

Gene models with high sequence identity

AT3G62460.1 [+] show detail - Putative endonuclease or glycosyl hydrolase
E-value: 0; Score: 100.00

InterPro Scan Digest

See the detailed result >

AT3G62460.1

Model type: Protein coding
Short Description: Putative endonuclease or glycosyl hydrolase
Computational Description: Putative endonuclease or glycosyl hydrolase; BEST Arabidopsis thaliana protein match is: Putative endonuclease or glycosyl hydrolase (TAIR:AT3G62210.1); Has 141 Blast hits to 133 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Link: InterPro Scan - TAIR