F27634

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F27634

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F27634

Determination of introduced cDNA(s)

  • RAFL09-70-N12 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-70-N12 - Resource: pda08704

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-70-N12 - full reading
    AACTTGTTAA TCAGTAAGAG CGTCTCAATT TCAGTGTTTC ATCGAATATG 
    CTGAGGGTTT CGACAATCTG AGATTCTTCT CCTTGTGTTC ATGTCCAAAG
    GAGATTCCTT TCTTCATTCT CCTTACCTTC TTAACAAACC CTTCTCTCTT
    ATTATCTAAT TCGCTTTTGT AGCTCTATAC GCAATTAGCA AATTTGGAGA
    AATCTCGATT ATAGCAATTT TCTTCAGTCT CCATGTACTT TTCCTCTGTA
    TTACTCTAAT TCAAATGTAT AAGATGTGCC ATGAACCTAC CAACATCTCT
    TCATCGGAGT CTGATTTTAC ATTCCTTGAG GAAGACCATC TCCCCTTGAC
    GTCACGGCGG AGTTTATTGC TATCGAGTGA AAGAGTCTCT CAACGTATCG
    CTGCTTATGT TCCTGCATCG AATGTTGATA GTGTCTTGAA AAGAGAAGAA
    GAAGATTGCT TCAATGAGCT GGGTTGCTAT AAGGTTGCCT GAATCTAACG
    TAGAGGATAA TACTGAAGAT TGCGATGAAA CTGAACTTTA TAAAATAAAA
    GCGGAGATTT CATGCGAAAA TGGGATAGCT TCGTCTTCTG GAGTCCAATT
    CAGCGGCTTT CTAGAGAAAA TTGATTCTGT CCTCTGTAGA AATTTTAGTA
    TATGTTCAGA ATCTGGAAGT CAGCTTGGTG GAATTCAAGA GAGTGATATT
    CCAATATCTC CTGAACGGTC CTTTGATTTG TCACCTGAAG CCAGTCTACC
    TGAGGTATCC AGCAGCAACA AAAATCCAAG AAAAAGAGTG AAAAGAGTCC
    AAAGGAATCC TCTACCTTTG AATGAGAATG AAATACAGTC TACTCAAGTA
    AAGGTTGATC CTTTGGCTGA TTGCGTCATG GAGGACAATG ACGAGAAAAA
    TCCTGTTACC TCAAAGCAGA TACCGGTCAA AAGAGAGGTA GAAACCCATG
    GTGAAGCTCT TGATGAAAAT GAGCTAGATT CTGTGAAACT GAGCTTTCGC
    TTGAATCGTT GTACATCTGC TCCTACACCT TTTAGGTGTA TGAAAAACGA
    AGCGGAGACC GCTAGTGAAA TGGATGAAGA TATTATAGAC CACATGAAAT
    TAATTGATCG ATTAAAGCTT CGATCTTTTC ATGGCTCAGG TCATCATGAA
    GATCTTAATT CACCGTCCTC AGGGTTTAGC TTCTGTACAT CTGATGAGTA
    CGTTAAACCT TCGAGGGTAT TTCGTCCTTG GAAGCGGAAG AAAACCGCCA
    CGGACTCAAT TGAGACAGCT TTGGAGGAAG ATGCTCCTGG TCTTTTGCAG
    GTACTGATTC AACAAGGGGT AACAGTTGAT GAACTTAGGC TTTATGGGAA
    TGAAGGTGGC GATGTTCCCT CAGATGATTC ACTTCTCAAT GAGAGTTTCT
    CGGAGCTCGA AGATGTGATC TCGCAGCTTT TCTACAAACG CGAGACGGGC
    ACGAAACTAC TTAATTCAAG TTTCTCAAAA GCTTCAAGAA CTAGCTATTG
    CTTGACCTGT CTATTCTCCC TCATCGAACA GGCGCGGTAT TTGCAGTTCC
    GCAAATGGCC TGTTGAGTGG GGCTGGTGCC GCGATCTCCA GTCTTTCATA
    TTCGTTTTCG AGAGACATAA CCGTATAGTA ATGGAACGGC CTGAATATGG
    CTACGCAACA TACTTCTTCG AGCTCAGCAA TACTGCATCA ATCAGATGGC
    AGGTCAAACG GTTAGTCTTG GCCATGAAAC TAGCAAGTTG TGGCCGATAT
    CAGCTGATTG AAAACAAGCC GTTACTGGTA GGAGAAGATA TGACTGCAGG
    CGAAGCAGAA GTTCTGATTA AGTATGGCTG GGTTGCAAAC ACGGGACTAG
    GGACGATGCT AAACTACCGC GATAGAGTCT ACCACGACAG GAAGACCCAA
    AAACCGACAT CAGAATGGAG ATCTAAGATT TCTGAGCTTC TTATTGATGG
    CTATAACAGT GGAACCATCG TCTCTACTCT AATTGCACCT CATGATGATG
    ATATTGATGA CGCCGGACTT GACATGGAAG ATGTTAAGCT TGAGCCTTAT
    TGAAGCTGTG AATCTGTTAT AGAGTCTTCT TCAACTGTTG ATTGTTTATT
    TACTTGGTCA GCTAAATTTA ATCGGATCAC AAACTACAAT AAGCGAAAAA
    ATTTCCC

    Gene models with high sequence identity

    1. AT5G16610.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
      E-value: 0; Score: 99.95

     

    InterPro Scan Digest

    See the detailed result >

    AT5G16610.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR