F28350

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T2	seed (PO:0009010)	increased length (PATO:0000573) (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F28350

Determination of introduced cDNA(s)

RAFL09-22-H23 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-22-H23 - Resource: pda05632

full reading [+] show sequence

AATTTCCACC GATCTTCTCC TCATAAAAAC ACCTCTTCCT CAACGAATTT 
TTTATCCATG AGTCGCATAA TGGGATTGTT CGATCTCGAG AAACACTTCG 
CCTTCTACGG TGCTTACCAT AGCAATCCGA TCAACATTCT AATCCACATC 
ATCTTCGTTT GGCCAATCTT CTTCTCAGTT TTACTTCTCC TCCACTCGTC 
GACCCCAATT TTCGACCCCT CTCAATTAGG GTTTTCTCAA TCGTTGACCC 
TCGACGGCGT TTTGCGATTT AACGTTGGGT TTATATTCGC CTTGATTTAT 
GCTCTGTTCT ATATCGGTTT GGATAAGAAA TCTGGATTTG TAGCTGCTCT 
TATGTGTTTC TCTTGCTGGG TTGGTTCCAG TTTTCTTGCT GTTCGACTAG 
GATCTTCTCT TGCCTTAAAG GTTGGGTTAG CATCTCAGCT GTTATGTTGG 
ACCGGGCAGT TCGTTGGCCA TGGAGTATTC GAGAAACGGG CACCTGCGCT 
GTTAGACAAT TTACTCCAAG CTTTTCTCAT GGCTCCTTTC TTCGTGTTGC 
TCGAGGTTCT TCAATCGGTT TTCGGGTATG AACCATATCC CGGTTTTCAA 
GCGCGTGTGA ATGCCAAGGT AGAAAGTGAC ATCAAGGAAT ATAGGGCAAA 
GAAGCAGAAG AAGAATAAGA TCACATAAGC TTGGATTATA TATAACTGAA 
GAACTTGAAC CCATTGTCGT GTTTCTATAA CCGAAATGAT AATAAGACCA 
CCATGATCCA TGGATTGATG TATTTGTGTG TAAACTATGT TTCAATATAT 
TGAATATAAT ATGTTTCAGC C

Gene models with high sequence identity

AT1G18720.1 [+] show detail - Protein of unknown function (DUF962)
E-value: 0; Score: 100.00

InterPro Scan Digest

Program	Description	E-value
Coil	coiled-coil	0
HMMPfam	DUF962	2.9e-33

See the detailed result >

AT1G18720.1

Model type: Protein coding
Short Description: Protein of unknown function (DUF962)
Computational Description: Protein of unknown function (DUF962); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF962 (InterPro:IPR009305); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF962) (TAIR:AT1G74440.1); Has 638 Blast hits to 636 proteins in 299 species: Archae - 0; Bacteria - 335; Metazoa - 3; Fungi - 143; Plants - 88; Viruses - 0; Other Eukaryotes - 69 (source: NCBI BLink).
Link: InterPro Scan - TAIR