F28736

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F28736

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F28736

Determination of introduced cDNA(s)

  • RAFL04-16-G19 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL04-16-G19 - Resource: pda02323

    full reading [+] show sequence

    Nucleotide sequence: RAFL04-16-G19 - full reading
    AAAAACTTTC AGTCAAATCT TGAGAACAGA AAGAAAGTCC ACGCGAGGAC 
    ATAAGCGCGT GTGATTTAAA ATCGTCGTCG TCGTCTTCCA CACCGACTTT
    AATCTGATTC TTAGAATCGC CGTTTGGTTT TTAACCAGAG AGATTATCTA
    CCAAGGAACG ATGATTATTG AAAGAGCTCG AGTTCCGTTG AGCCGATGGC
    AACAAGCGGC CGTGGCGATG GGATCTGCTC TCGGTGCGTT GGTTGATCCT
    CGTAGAGCGG ATCTAATCGC TGCTCTCGGC GAAACTACCG GTAAACCAGC
    TTTTGAAATG GTTCTTGAGA GAATGAAGAA GAGCGAAGAA GGAAGAGCTA
    TATTATTGGA GCGTCCTCGA GTTGTGTCAG AGCAAGTAGG TCATGCTTGG
    GATCTACCAG AAAACACATT TGGAGCTGCA TATGCTAAAT TCATGGGATC
    TAGAAACTTC TCTCCCGATG ATCGTCCGCC CGTAAGATTC ATGGAGACGG
    ATGAATTGGC TTACGTAGCG ACACGGGCAC GCGAAGTTCA CGACTTATGG
    CACACTCTGT TTGGCCTTCC TACGAATCTT ATCGGCGAGT CGTCTTTGAA
    AGTTATCGAG TTTGAGCAAA TGTATCTTCC GATGTGTATG CTCTCTGTGA
    TTGGAGGTAC TGTGAGGTTC AACGAGAAGC AAAGATCAAT GTTCTTGAAG
    CATTACCTTC CTTGGGCTGT TCGTGCTGGA AGACAATGCA CTGACCTCAT
    GTGTGTGTAC TATGAGCGTC ACTTTAGTGA AGACTTGGAG CAAGTTCGTA
    GAAAATGGGG AATCATCCCT GCTCCTCAAC ATCCTAAATG ACGGTTCTAG
    TTTAATCTGT TTTCGAATCA CTTAGTTATG CCAAATCTCT TATAAATGTG
    TAGTGGATTG GATTAAAAGT TGTACTCGCA TTTGATGGTT AATAAGAGAC
    AAGTTGG

    Gene models with high sequence identity

    1. AT2G03690.1 [+] show detail - coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    HMMPfam Coenzyme Q biosynthesis Coq4 1.7e-89
    HMMPanther UBIQUINONE BIOSYNTHESIS PROTEIN 7.7e-59

    See the detailed result >

    AT2G03690.1

    Model type
    Protein coding
    Short Description
    coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein
    Curator Summary
    Ubiquinone biosynthesis protein COQ4 homolog.
    Computational Description
    coenzyme Q biosynthesis Coq4 family protein / ubiquinone biosynthesis Coq4 family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: ubiquinone biosynthetic process; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Coenzyme Q biosynthesis Coq4 (InterPro:IPR007715); Has 675 Blast hits to 675 proteins in 251 species: Archae - 0; Bacteria - 141; Metazoa - 162; Fungi - 176; Plants - 60; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR