F28748

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F28748

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F28748

Determination of introduced cDNA(s)

  • RAFL06-12-N03 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-12-N03 - Resource: pda03121

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-12-N03 - full reading 
    AAAACATCTG AACACCCAAA GACACAGGAA GAGAGCTAAA GCTGATATAT 
    ACTAAGTACT AAGATCATTT GATCAACCTA ATCATCAACA CCACAAAATT 
    TTCTTTTCTT GTTTCTCTAA TCGATTAATT TAGTAATAAT GTCTGGAAGA 
    GGGAAAGTGA AATCGGAGCC GATGAAGGTT GTGTTCATTA ACACACAGTA 
    TGTTGAGACA GATGCTCGTA GCTTCAAGAC CGTTGTTCAA GAACTCACCG 
    GTAAGAACGC CATCGTCGCC GCCGGTCCTT TTGATTCGCC CTCTGCTTTC 
    GACGGCCGTT GTTACGATGG CGGTAGTAAA ATCGGTGAAG ATACCAGACA 
    GCTCCACGGC GGTGGCGGCG GAGGAGGACG AATGGGGACG ACGACGGAGT 
    TCGATAGATT ATTCAAAGAG ATGCCTCACA TGGAAGAATT GTATAAACTA 
    TGGTCAGAAT ATTGAGTCAT TAATAATTTC TGTGCAATGA TTTTTAAATC 
    ATTCGTTTTC TTCCAAAATC TTTTCTTTTT TATCTAATGA GATAATGTTG 
    TTGTTGATTT GATTTAATCA TCTTAACTGG ATCGTCACTC TTGAGATTAG 
    GTCCAATAAC GAATGTTGTG TTTTGGAAAG TAATTATGAG TTACCTTTCA 
    GTC

    Gene models with high sequence identity

    1. AT1G78410.1 [+] show detail - VQ motif-containing protein
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G78410.1

    Model type
    Protein coding
    Short Description
    VQ motif-containing protein
    Computational Description
    VQ motif-containing protein; CONTAINS InterPro DOMAIN/s: VQ (InterPro:IPR008889); BEST Arabidopsis thaliana protein match is: VQ motif-containing protein (TAIR:AT1G17147.1); Has 53 Blast hits to 53 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR