F28807

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F28807

Phenotypes

Morphological phenotypes

Generation Anatomical entity
/structure development stage		 Phenotypes
T2 seed (PO:0009010)
  • increased size (PATO:0000586)
    (Seed::Shape::large)
  • increased length (PATO:0000573)
    (Seed::Shape::long)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F28807

Determination of introduced cDNA(s)

  • RAFL05-04-I18 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-04-I18 - Resource: pda02444

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-04-I18 - full reading 
    AGCTTAGCTT TCTGGTTTTT CTTCTTCTGC ACCTTAAATA TACGCCCAGA 
    AAATTCCTCT GGTCACCAAA CCAAACCAAA ACCGACTCTT TCTTTGAATT 
    TCTGAAAGGA AACGATAAGG GTTTCGAGAA AAATCATTCC TTTTTGACTT 
    AAAAGACGCG TTTCCACATT TTTGGCGTTT CTTCTCTGGG TTTGTTTTGT 
    CTCTAGACGA AGACGATCAC GGGTTTTAAC ATATTCGTGT GTACGCGTGT 
    ATCTCCAATT TTGCGAATAG GGTTTGAAGT AATCGTTTTG TTTGTGAGGA 
    TAACGACTCG CGGGGTTACG CATAGCAGGT TCCTGGCTTC TCTACTGTCA 
    GGAGGGGCCT TGAGTCTTTG GAGTTACCAC AGTAGACAGA ACCCCAGTGG 
    GTGACTTTTT GAAAAGTCTT CTTGATTTAG TGCTGCACAT TTTCGCTGTG 
    GAGCTACAAT CAGAATATTA GAGAAGATAT GGGAATCTTT TCACGCAGTT 
    CAATTAGTAG GAAATCAAAA GATGGAATGA AGATCATTGC AACGGCATTT 
    TTTGGAGTAA CATTTGGCTT TCTGATTGGA ATATCTTTTC CATCATTATC 
    AATCACTAAG GTGAGTCTCC CTACAAACTT TCTTCCTTCA AACGATCTCT 
    CATATATCGA GGAAAAGGGT TCGAAAATTG CAACTCCAGA AAGTCATAAA 
    GCTTGGTCAT CATCAAAGGG TAACGATAGC AGCTCATCTA CTCCGATTGA 
    CAAATCAAAG ATCTGGGTAC CTTCTAATCC TCGTGGTGCT GAAATGTTGC 
    CACCGGGTAT GGTTGCTGCT GAATCAGACT TCTATTTGCG CAGATTATGG 
    GGTTTACCGC ATGAGGATTT GAAAAGTGAA CCAAGATACC TCGCAACATT 
    TACAGTGGGT ATTAATCAGA AAGCAAATAT CGATGCTTGT GTCAAGAAGT 
    TTTCAGAAAA CTTCACTATT GTCCTGTTTC ACTATGACGG CCGGGTAACT 
    GAGTGGGATG AGTTTGAATG GTCAAAGACT GCTATACACA TTAGCGTACG 
    AAAGCAGACA AAATGGTGGT ATGCAAAGAG GTTTTTGCAC CCTGATATTG 
    TAGCAAGATA TGATTATATC TTCGTCTGGG ATGAAGACCT GGGTGTCGAG 
    CATTTTAACG CAGAAGAGTA CGTAAAGATG GTGAAGAAGC ACGGCCTGGA 
    GATTTCCCAA CCTGGCTTGG AACCAAACCA GGGACTAACG TGGCAAATGA 
    CAAAGAGACG AGGAGATATG GAAGTTCACA AGATAACAGA AGAAAGACCT 
    GGATGGTGCT CAGATCCTCA TCTCCCTCCA TGTGCTGCAT TCGTAGAGAT 
    CATGGCTCCT GTATTTTCAA GAAATGCCTG GCGATGCGTG TGGCATGTGA 
    TCCAGAATGA TTTGGTACAC GGTTGGGGTC TTGACTTTGC ACTCAGAAGA 
    TGTGTTGAGC CTGCACATGA GAAGATAGGA GTAGTTGATT CTCAATGGGT 
    CGTTCATCAA TCTTTTCCTT CCCTTGGCAA CCAAGGTGAG GCGACAGACG 
    GGAAAGCACC ATGGCAAGGG GTGAGGGATA GATGCAAAAA GGAATGGACA 
    ATGTTCCAGA GTAGAATGGC TAACGCAGAG AAGGATTATT TCAAATCCTT 
    ACAAGTAGAA GGCTCCTCAA ATTCAACAGC CACAACCATT TAATAGGAGA 
    GTTCTTAAAG TAGCTAGACG CTGACAGATT CAGTTTTACT AGTGCGTTCT 
    TGCATTTACA TATAGAGTCT GTATATGTTA ATGTAGTAGA TATTACCCAT 
    CACTACAAAA TCATCACCAA CCTTCCATCG AATAAACAAA AAAAGATGAA 
    TGTTTTGAAC CGCC

    Gene models with high sequence identity

    1. AT1G67850.1 [+] show detail - Protein of unknown function (DUF707)
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G67850.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF707)
    Computational Description
    Protein of unknown function (DUF707); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF707 (InterPro:IPR007877); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF707) (TAIR:AT1G13000.2); Has 324 Blast hits to 323 proteins in 26 species: Archae - 0; Bacteria - 13; Metazoa - 0; Fungi - 0; Plants - 305; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR