F29150

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Phenotypes

Morphological phenotypes

Generation	Anatomical entity /structure development stage	Phenotypes
T1
	cauline leaf (PO:0000013)	decreased size (PATO:0000587) (Cauline leaf::Shape::small)
	rosette leaf (PO:0000014)	decreased size (PATO:0000587) (Rosette leaf::Shape::small) abnormal (PATO:0000460) (Rosette leaf::Others) present in greater numbers in organism (PATO:0000470) (Rosette leaf::Number::many)
	sporophyte vegetative stage (PO:0007134)	decreased speed (PATO:0000304) (Adult plant::Growth::slow)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin)
T2
	cauline leaf (PO:0000013)	decreased size (PATO:0000587) (Cauline leaf::Shape::small)
	rosette leaf (PO:0000014)	increased width (PATO:0000600) (Rosette leaf::Shape::wide) abnormal (PATO:0000460) (Rosette leaf::Others)
	stem (PO:0009047)	decreased thickness (PATO:0000592) (Stem::Shape::thin)

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F29150

Determination of introduced cDNA(s)

RAFL09-12-L09 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-12-L09 - Resource: pda01667

full reading [+] show sequence

GATCGCATGT GGTAGTTCCT TTTTGGATCA GTGGTTTTTG AAATGGAGAA 
AGTTTCGTCG CCGTCTTCCT CTTTTTCACG GAGGTCTGCT TATCTTGAAG 
CTCTTACACA AGAGATTAAG AAGAAGCTTA CACGGGCTGT TGTCTCTCCA 
GCACAAACAC GCAACTTGTT ACAAGACTTA TTTGCTGATA TAGCTCTCGA 
AGTAGACGAT CGAGCCAAAG ATGTGATCCT TAGCAAAGAA GAGGATTTGA 
TTACTTCTGA TGAAGCAGAT GCTGATGGTC CGTTATGCTT TTTCGATGTC 
CTTGCTGATT ACTATGTGAA AGTGTCTGAG AGGGGGAAGG ATATACTTGA 
TTTGATGGTG CAGCTGTGGA GCCAGTCCTT TGCATCACAT ATATTCTCTC 
TACTGTTCCA TAAATGGCTG TTTGAGGTTG AGCTTGACAA TCAAGAAATA 
CTCCTGCGAT ATTCTTCGGC TCTGGTGCAG GGAGCAACAA ATGTGTTCTG 
GATAGACATC CAGACAAATA CGAGGCGCTT CCAAAGTCTC TTTCGGTATC 
TCCTTGAGGA AGTTGCTTTG GAGCAGATAC GATTGAAAAA ATTCCCATTC 
AGGCTCAGAG GGAACTGTAT CTCTTACTCT CTAGGTTCAT TTTCTTTTAC 
AATTCAGTGG ATAAACTCGA TAGCTTCTTG AGGAACTTCC CAGAGTTTCC 
AAATGCTTTC TTGATTGGAG GACCTGGAGA TTTCCTTGTT ATCGAACTAA 
CTGATCAGCT GCAAAAACTG AAGGTGGAAC CAGTGCTGCT ACATTATCTT 
TCTCAGATGA AGATTCTTCA AGGTATGGAA CTGAGAATGA CTACTAGCAC 
AAGGTTAAAG GCGTGTTTAT ACAGTTTTAC CTCTCCTGGA GGTCCAATGT 
ACCCGACAAG AGCCGTCCGT CATGCAGCCT GGGATGCTTT GGATTCCCTC 
TTTCCTGTTG GGCGTTACCC GAGGCATCTC ATTAGTCTAT TTTTCAGGCT 
GCTATATCCG TGGTACTGGC CATCCTCATG CTGGAACTTT GTGGTTTCTT 
GCATTAAGGC GGTACTCTAT TCTATCGTAA GGCTCATCTT TTCACGGCGA 
GAAAAGCCAA GGCAGAGCTG AATAGCTTTT ACTTTTGATG AAGCTTACAG 
CAGGAATCCA ATCCTTGTGT ATATAATGTG GTTTTGGTCA AAGAGGCAAA 
CCAGTGAACC TTACCTTCAC CTGTATTACT GTCTACAGAG AAGATAAACT 
CCGTTTTGTG AAAGATCCCA TGGATAAGCT TTTGACTTGT TTTGTTGTCA 
TTGGTAAAAT TGTTATTTTG CTATAGAGGA CGTGTATTGT GTCCAGAAAC 
CCTTCTTGTG TAGAAGATAA ACCATTTCGG CCTTCTGTTT TAGTTGTATT 
GGATCTGTAA GAACTAAGAA CCCTTAAACT TTTCACCATT CATGGACCAT 
GATATCATCT

Gene models with high sequence identity

AT5G59960.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
E-value: 0; Score: 99.93

InterPro Scan Digest

See the detailed result >

AT5G59960.1

Model type: Protein coding
Computational Description: unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Link: InterPro Scan - TAIR