F29827

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F29827

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F29827

Determination of introduced cDNA(s)

RAFL09-19-F01 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-19-F01 - Resource: pda05503

full reading [+] show sequence

AAAAAACTTC AAGAAAAAAA GATTCTTCAA AAGAGCAAAA AATCAATGGA 
GAGAGCAAAG TCGAGGAAGC CTCATATCAT GATGATACCA TACCCACTTC 
AAGGTCACGT TATCCCTTTT GTCCACTTAG CCATCAAACT TGCTTCTCAT 
GGCTTCACCA TCACTTTCGT CAACACCGAC TCCATCCACC ACCACATCTC 
CACCGCTCAC CAAGATGACG CCGGTGACAT CTTCTCCGCC GCTCGCAGCT 
CCGGCCAGCA CGACATACGT TACACCACCG TGAGCGACGG CTTCCCTTTA 
GACTTTGACC GGTCACTGAA CCATGACCAG TTTTTCGAAG GCATTCTCCA 
CGTCTTCTCT GCCCACGTGG ATGATCTCAT CGCCAAACTC TCCCGCCGTG 
ATGATCCTCC CGTGACTTGC TTGATCGCCG ACACGTTTTA TGTTTGGTCA 
TCTATGATTT GCGACAAGCA CAACCTTGTA AATGTCTCGT TTTGGACCGA 
ACCTGCCTTG GTCCTCAATC TCTATTATCA CATGGATCTC CTCATATCTA 
ACGGTCATTT CAAATCTCTT GATAATCGTA AAGACGTGAT CGATTACGTA 
CCAGGGGTTA AAGCAATAGA ACCAAAGGAC TTGATGTCAT ATCTTCAAGT 
AAGCGACAAA GACGTAGACA CAAATACAGT AGTATACAGA ATATTATTCA 
AGGCCTTTAA AGACGTCAAG AGAGCCGACT TCGTCGTATG CAACACGGTG 
CAAGAGCTCG AACCAGACTC TCTCTCGGCT CTACAAGCCA AACAACCGGT 
TTACGCTATC GGTCCGGTTT TCTCAACTGA TTCGGTAGTT CCCACAAGCT 
TATGGGCCGA GTCAGACTGT ACCGAGTGGC TTAAGGGCCG GCCCACTGGG 
TCAGTTCTCT ACGTCTCGTT TGGTAGCTAT GCACATGTTG GTAAGAAGGA 
GATTGTTGAG ATAGCTCATG GGCTTTTGCT TAGTGGGATT AGTTTCATTT 
GGGTTTTACG TCCGGATATA GTTGGATCCA ACGTACCAGA TTTTCTTCCA 
GCCGGGTTTG TGGACCAAGC CCAAGATCGA GGTCTTGTGG TCCAATGGTG 
CTGCCAGATG GAAGTTATTT CAAATCCGGC CGTGGGAGGG TTTTTCACAC 
ATTGTGGATG GAATTCAATT CTAGAGAGCG TTTGGTGTGG TTTGCCTTTG 
TTGTGTTATC CACTTTTGAC AGATCAGTTC ACGAATAGGA AGCTTGTGGT 
CGATGATTGG TGCATTGGGA TTAATCTTTG TGAGAAGAAG ACAATCACAA 
GGGACCAAGT CTCAGCGAAT GTTAAAAGAT TGATGAATGG AGAAACTTCA 
AGTGAGCTAA GAAACAATGT TGAAAAGGTT AAACGTCATC TCAAAGATGC 
GGTTACAACC GTTGGATCTT CGGAGACGAA TTTTAACTTG TTTGTTAGTG 
AGGTCCGAAA TAGAATAGAA ACTAAATTGT GTAATGTAAA TGGACTAGAA 
ATAAGTCCAT CAAACTAAAC AATC

Gene models with high sequence identity

AT2G36970.1 [+] show detail - UDP-Glycosyltransferase superfamily protein
E-value: 0; Score: 99.93

InterPro Scan Digest

Program	Description	E-value
superfamily	UDP-Glycosyltransferase/glycogen phosphorylas	9.2e-45
PatternScan	UDP-glucuronosyl/UDP-glucosyltransferase	0
HMMPanther	UDP-GLUCOSYLTRANSFERASE	1.3e-126
HMMPanther	UDP-glucuronosyl/UDP-glucosyltransferase	1.3e-126
Gene3D	no description	6.8e-13
HMMPfam	UDP-glucuronosyl/UDP-glucosyltransferase	3.8e-22

See the detailed result >

AT2G36970.1

Model type: Protein coding
Short Description: UDP-Glycosyltransferase superfamily protein
Computational Description: UDP-Glycosyltransferase superfamily protein; FUNCTIONS IN: UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UDP-glucuronosyl/UDP-glucosyltransferase (InterPro:IPR002213); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT2G28080.1); Has 6237 Blast hits to 6170 proteins in 304 species: Archae - 0; Bacteria - 63; Metazoa - 975; Fungi - 25; Plants - 5115; Viruses - 22; Other Eukaryotes - 37 (source: NCBI BLink).
Link: InterPro Scan - TAIR