F29848

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F29848

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F29848

Determination of introduced cDNA(s)

  • RAFL09-67-C15 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-67-C15 - Resource: pda12365

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-67-C15 - full reading 
    AGATTTCTCG GACTTTCTTT CAATAGTGGG AAAAAGACAC AGAATCTCAA 
    AAAAGTCCTC TCTTGTCCAA AGTCCAAAGC TTTTGAAAGA GACCATAAAA 
    ACAGAGCTTA ATCTCTCTCT GTCTCTGTCT CTCTCTCTTT TGGAGGCTTG 
    AGGATGACGA GAAGAGCTGA ATTTGAGATG GGTTTGTTCG TGATTCTTCA 
    ATCCATGTTT CTGATATCTC TATGTTCATC ACAGAAACCT GAGGAGTTCT 
    TACCTGAGAT ATCACCAGAT ACTTCTCCTC AACCGTTTCT TCCTTTCATT 
    GCACCTTCTC CAATGGTTCC ATACATAAAT AGTACCATGC CTAAACTATC 
    AGGGCTTTGC TCGCTTAATT TCAGTGCGTC TGAGAGTTTG ATTCAGACTA 
    CTTCACACAA CTGTTGGACT GTTTTTGCTC CATTGTTGGC AAATGTGATG 
    TGTTGTCCTC AGCTAGATGC TACACTCACA ATAATCCTTG GTAAAGCGAG 
    TAAAGAAACC GGTTTGCTTG CTTTAAACAG AACCCAGTCT AAGCACTGTC 
    TCTCGGATTT AGAGCAAATC TTGGTAGGAA AAGGCGCTTC AGGTCAGCTT 
    AATAAGATCT GTTCTATTCA CTCGTCGAAT CTCACTTCTT CGTCGTGCCC 
    TGTTATCAAT GTCGATGAGT TTGAAAGCAC GGTGGATACA GCGAAACTTC 
    TTTTGGCCTG TGAAAAAATT GATCCTGTGA AGGAATGTTG CGAAGAGGCT 
    TGCCAAAATG CGATACTCGA TGCTGCTACG AATATATCTC TTAAAGCATC 
    AGAAACTTTA ACTGATAATT CGGATAGGAT CAATGACTGC AAGAACGTAG 
    TAAACCGCTG GCTCGCTACT AAACTTGACC CTTCTCGGGT TAAGGAAACT 
    CTCAGAGGAT TAGCAAACTG CAAAATCAAT AGAGTTTGTC CTCTTGTCTT 
    TCCGCACATG AAGCATATTG GTGGTAACTG CAGCAACGAG TTGAGTAACC 
    AAACGGGTTG TTGCCGTGCA ATGGAGAGTT ATGTGTCTCA CTTGCAAAAG 
    CAAACACTTA TAACCAATTT GCAAGCTTTA GATTGCGCAA CCAGCCTTGG 
    GACAAAGTTA CAGAAACTGA ACATCACTAA GAACATATTC AGTGTTTGTC 
    ATATAAGTCT CAAGGACTTC TCTCTTCAAG TTGGAAACCA AGAATCTGGT 
    TGTCTATTAC CGAGCCTACC ATCGGATGCG ATATTTGATA AAGACACGGG 
    GATAAGCTTT ACTTGTGACC TCAATGACAA CATTCCCGCT CCGTGGCCTT 
    CATCTTCTCT ATCCTCAGCC TCTACCTGTA AAAAACCTGT TAGAATTCCT 
    GCTCTTCCAG CTGCTGCCTC CTCGCAACCT CGTCTCCACG ATGAAGGAGT 
    GACACGTTTG GTGATCTTTG TCTTGTCTAT GCTTCTTGTG ATGCTTCTGT 
    CATAGTACCA GAACTAAGCC GGATCCAGTC TTCTCTTATA CCGGTTTACT 
    AGTCAATAGG TGTGTTTGTG TAGATCAAAC TGGTACAGTC AGCTACAAAA 
    GTCGGATGTT GACATGACCG GTTCAAGTGT ATGAGTTGTT GAGGTATAAG 
    TTTCGGAAAG TCTTTTTATC TTTATTGATT TATGATTCTT GAAAACCTTT 
    TTAATGTAAA GAAAAGGTCT TGTAGGGTTT ATAACGTAAG GTTATAATAT 
    ATTTATTTAT AGACTGTCGA TTTCATAATT

    Gene models with high sequence identity

    1. AT1G61900.1 [+] show detail - unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT1G61900.1

    Model type
    Protein coding
    Computational Description
    unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: anchored to plasma membrane, plasma membrane, anchored to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G30700.1); Has 65 Blast hits to 65 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR